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Acknowledgments |
page vii |
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Introduction: Biology and physics |
1 |
| 1 |
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The cell: fundamental unit of developmental systems |
6 |
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The eukaryotic cell |
6 |
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Diffusion |
8 |
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Osmosis |
15 |
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Viscosity |
16 |
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Elasticity and viscoelasticity |
21 |
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Perspective |
22 |
| 2 |
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Cleavage and blastula formation |
24 |
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The cell biology of early cleavage and blastula formation |
24 |
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Physical processes in the cleaving blastula |
29 |
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Physical models of cleavage and blastula formation |
39 |
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Perspective |
50 |
| 3 |
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Cell states: stability, oscillation, differentiation |
51 |
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Gene expression and biochemical state |
52 |
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How physics describes the behavior of a complex system |
53 |
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Oscillatory processes in early development |
57 |
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Multistability in cell-type diversification |
63 |
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Perspective |
76 |
| 4 |
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Cell adhesion, compartmentalization, and lumen formation |
77 |
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Adhesion and differential adhesion in development |
78 |
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The cell surface |
80 |
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Cell adhesion: specific and nonspecific aspects |
81 |
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The kinetics of cell adhesion |
84 |
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Differential adhesion of embryonic tissues |
90 |
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The physics of cell sorting |
95 |
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Perspective |
97 |
| 5 |
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Epithelial morphogenesis: gastrulation and neurulation |
99 |
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Physical properties of epithelia |
100 |
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Gastrulation |
108 |
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Convergence and extension |
117 |
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Neurulation |
122 |
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Perspective |
128 |
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Appendix: Linear stability analysis |
128 |
| 6 |
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Mesenchymal morphogenesis |
131 |
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Development of the neural crest |
134 |
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The extracellular matrix: networks and phase transformations |
138 |
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Mesenchymal condensation |
149 |
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Perspective |
154 |
| 7 |
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Pattern formation: segmentation, axes, and asymmetry |
155 |
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Basic mechanisms of cell pattern formation |
157 |
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Segmentation |
162 |
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Epithelial patterning by juxtacrine signaling |
168 |
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Mesoderm induction by diffusion gradients |
171 |
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Reaction–diffusion systems |
173 |
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Control of axis formation and left–right asymmetry |
177 |
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Perspective |
187 |
| 8 |
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Organogenesis |
188 |
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Development of the cardiovascular system |
190 |
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Fractals and their biological significance |
197 |
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Branching morphogenesis: development of the salivary gland |
203 |
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Vertebrate limb development |
210 |
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Perspective |
222 |
| 9 |
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Fertilization: generating one living dynamical system from two |
223 |
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Development of the egg and sperm |
224 |
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Interaction of the egg and sperm |
233 |
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Propagation of calcium waves: spatiotemporal encoding of postfertilization events |
236 |
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Surface contraction waves and the initiation of development |
242 |
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Perspective |
247 |
| 10 |
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Evolution of developmental mechanisms |
248 |
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The physical origins of developmental systems |
249 |
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Analyzing an evolutionary transition using physical concepts: segmentation in insects |
256 |
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The evolution of developmental robustness |
262 |
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Perspective |
272 |
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Glossary |
273 |
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References |
291 |
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Index |
327 |