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Importance and future of individual markers for the ecosystem approach to fisheries

Published online by Cambridge University Press:  20 October 2009

Jean-Marc Fromentin ,
Bruno Ernande ,
Ronan Fablet  and
Hélène de Pontual
Jean-Marc Fromentin
Affiliation:
Ifremer, Centre de recherche halieutique méditerranéenne et tropicale, avenue Jean Monnet, BP 171, 34203 Sète Cedex, France
Bruno Ernande
Affiliation:
Ifremer, Laboratoire ressources halieutiques, avenue du Général de Gaulle, BP 32, 14520 Port-en-Bessin, France Ecology and Evolution Program, International Institute for Applied Systems Analysis (IIASA), Schlossplatz 1, A-2361 Laxenburg, Austria
Ronan Fablet
Affiliation:
Institut Telecom/Telecom Bretagne, CNRS UMR 3192 LabSTICC, Technopôle Brest-Iroise – CS 83818, 29238 Brest Cedex 3, France Université européenne de Bretagne, Institut national des sciences appliquées (INSA), 12 avenue Janvier, 35000 Rennes, France
Hélène de Pontual
Affiliation:
Ifremer, Laboratoire de sclérochronologie des animaux aquatiques STH/LASAA, Z.I. Pointe du diable, BP 70, 29280 Plouzané, France
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Abstract

The use of genetic, biochemical and electronic markers in population biology and ecology has been growing tremendously during the last two decades. The first part of this paper aims at reviewing the main principles and advances of these individual markers through a few key applications on exploited marine fish populations. The second part is more prospective and investigates some possibilities that could arise in the near future through: (i) the development of new markers, (ii) the combination of different markers and (iii) the combination of quantitative approaches -whether classical or new- with individual markers. It is finally stressed how crucial individual markers will be to unravel the biocomplexity of wild fish populations and the key role they should play in the implementation of the ecosystem approach to fisheries.

Keywords

Genetic markerBiochemical markerElectronic tagOtolithIsotopePopulation structureStatistical and mechanistic modelFisheries
Type
Research Article
Information
Aquatic Living Resources , Volume 22 , Issue 4 , October 2009 , pp. 395 - 408
Copyright
© EDP Sciences, IFREMER, IRD, 2009

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References

Allemand D., Mayer Gostan N., de Pontual H., Boeuf G., Payan P., 2007, Fish otolith calcification in relation to endolymph chemistry. In: Bäuerlein E. (Ed.) Handbook of Biomineralization. Wiley-VCH, Weinheim, pp. 291–308.
Andrus, C.F.T., Crowe, D.E., Sandweiss, D.H., Reitz, E.J., Romanek, C.S., 2002, Otolith $\delta ^{18}$ O record of mid-Holocene sea surface temperatures in Peru. Science 295, 1508–1511. CrossRef
Arnold G.P., Dewar H., 2001, Electronic tags in marine fisheries research: a 30-year perspective. In: Sibert J.R. Nielsen J.L. (Eds.) Electronic tagging and tracking in marine fisheries. Kluwer Academic Publishers, Dordrecht, pp. 7–64.
Bekkevold, D., Clausen, L.A.W., Mariani, S., André, C., Christensen, T.B., Mosegaard, H., 2007, Divergent origins of sympatric herring population components determined using genetic mixture analysis. Mar. Ecol. Prog. Ser. 337, 187–196. CrossRef
Bentzen, P., Olsen, J.B., McLean, J.E., Seamons, T.R., Quinn, T.P., 2001, Kinship analysis of Pacific salmon: Insights into mating, homing and timing of reproduction. J. Hered. 92, 127–136. CrossRef
Bestley S., Patterson T.A., Hindell M.A., Gunn J.S., 2008, Feeding ecology of wild migratory tunas revealed by archival tag records of visceral warming. J. Anim. Ecol.77, 1223–1233.
Bigelow, K.A., Maunder, M.N., 2007, Does habitat or depth influence catch rates of pelagic species? Can. J. Fish. Aquat. Sci. 64, 1581–1594. CrossRef
Block, B.A., Dewar, H., Blackwell, S.B., Williams, T.D., Prince, E.D., Farwell, C.J., Boustany, A., Teo, S.L.H., Seitz, A., Walli, A., Fudge, D., 2001, Migratory movements, depth preferences and thermal biology of Atlantic bluefin tuna. Science 293, 1310–1314. CrossRef
Block, B.A., Teo, S.L.H., Walli, A., Boustany, A., Stokesbury, M.J., Farwell, C.J., Weng, K.C., Dewar, H., Williams, T.D., 2005, Electronic tagging and population structure of Atlantic bluefin tuna. Nature 434, 1121–1127. CrossRef
Blouin, M.S., 2003, DNA-based methods for pedigree reconstruction and kinship analysis in natural populations. Trends Ecol. Evol. 18, 503–511. CrossRef
Bourjea, J., Lapègue, S., Gagnevin, L., Broderick, D., Mortimer, J.A., Ciccione, S., Roos, D., Taquet, C., Grizel, H.M.E., 2007, Phylogeography of the green turtle Chelonia mydas in the Southwest Indian Ocean. Mol. Ecol. 16, 175–186. CrossRef
Bravington M., Grewe P., 2007, A method for estimating the absolute spawning stock size of SBT using close-kin genetics. CCSBT 8th Meeting of the Stock Assessment Group and CCSBT 12th Meeting of the Extended Scientific Committee.
Brill, R.W., Lutcavage, M.E., Metzger, G., Bushnell, P.G., Arendt, M., Lucy, J., Watson, C., Foley, D., 2001, Horizontal and vertical movements of juvenile bluefin tuna (Thunnus thynnus) in relation to oceanographic conditions of the western North Atlantic determined with ultrasonic telemetry. Fish. Bull. 100, 155–167.
Broecker W.S., Peng T.-H., 1982, Tracers in the sea. Lamont-Doherty Geological Observatory.
Browman, H.I., Cury, P., Hilborn, R., Jennings, S., Lotze, H.K., Mace, P.M., Murawski, S.A., Pauly, D., Sissenwine, M., Stergiou, K.I., Zeller, D., 2004, Theme Section: Perspectives on ecosystem-based approaches to the management of marine resources. Mar. Ecol. Prog. Ser. 274, 269–303. CrossRef
Brumfield, R.T., Beerli, P., Nickerson, D.A., Edwards, S.V., 2003, The utility of single nucleotide polymorphisms in inferences of population history. Trends Ecol. Evol. 18, 249–256. CrossRef
Campana, S.E., 1999, Chemistry and composition of fish otoliths: pathways, mechanisms and applications. Mar. Ecol. Prog. Ser. 188, 263–297. CrossRef
Carlsson, J., McDowell, J.R., Diaz-Jaimes, P., Carlsson, J.E.L., Boles, S.B., Gold, J.R., Graves, J.E., 2004, Microsatellite and mitochondrial DNA analyses of Atlantic bluefin tuna (Thunnus thynnus thynnus) population structure in the Mediterranean Sea. Mol. Ecol. 13, 3345–3356. CrossRef
Casteele, T.V.D., Galbusera, P., Matthysen, E., 2001, A comparison of microsatellite-based pairwise relatedness estimators. Mol. Ecol. 10, 1539–1549. CrossRef
CCSBT, 2008, Report of the 9th Meeting of the Stock Assessment Group and 5th Meeting of the Management Procedure Workshop. Commission for the Conservation of Southern Bluefin Tuna, Rotorua, New Zealand.
Chistiakov, D.A., Hellemans, B., Volckaert, F.A., 2006, Microsatellites and their genomic distribution evolution function and applications: A review with special reference to fish genetics. Aquaculture 255, 1–29. CrossRef
Dagorn L., Bertrand A., Bach P., Petit M., Josse E., 2001, Improving our understanding of tropical tuna movements from small to large scales. In: Sibert J.R. Nielsen J.L. (Eds.) Electronic tagging and tracking in marine fisheries. Kluwer Academic Publishers Dordrecht, pp. 369–384.
Daverat, F., Limburg, K.E., Thibault, I., Shiao, J.C., Dodson, J.J., Caron, F.O., Tzeng, W.N., Iizuka, Y., Wickstrom, H., 2006, Phenotypic plasticity of habitat use by three temperate eel species Anguilla anguilla A. japonica and A. rostrata. Mar. Ecol. Prog. Ser. 308, 231–241. CrossRef
De Metrio G., Arnold G.P., de la Serna J.M., Yannopoulos C., Megalofonou P., Buckley A.A., Pappalepore M., 2001. Further results of tagging Mediterrranean bluefin tuna with pop-up satellite detected tags. Col. Vol. Sci. Pap. ICCAT 52, 773–783.
de Pontual H., Geffen A.J., 2002, Otolith microchemistry. In: Panfili J., Pontual H. de, Troadec H., Wright P.J. (Eds.). Manual of fish sclerochronolgy. Ifremer- IRD Brest, pp. 245–302.
de Pontual, H., Lagardere, F., Amara, R. Bohn, M. Ogor, A., 2003, Influence of ontogenetic and environmental changes in the otolith microchemistry of juvenile sole (Solea solea). J. Sea Res. 50, 199–210. CrossRef
de Pontual, H., Lagardère, F., Troadec, H., Batel, A., Desaunay, Y., Koutsikopoulos, C., 2000, Otoliths imprinting of sole (Solea solea) from the Bay of Biscay: a tool to discriminate individuals from nursery origins? Oceanol. Acta 23, 497–513.
de Villiers, S., 1999, Seawater strontium and Sr/Ca variability in the Atlantic and Pacific oceans. Earth Planet Sci. Lett. 171, 623–634. CrossRef
Druffel E.R.M., 1997. Geochemistry of corals: Proxies of past ocean chemistry ocean circulation and climate. Proc. Nat. Acad. Sci. US 94, 8354–8361.
Elsdon, T.S., Gillanders, B.M., 2006, Temporal variability in strontium, calcium, barium and manganese in estuaries: Implications for reconstructing environmental histories of fish from chemicals in calcified structures. Estuar. Coast. Shelf Sci. 66, 147–156. CrossRef
Elsdon T.S., Wells B.K., Campana S.E., Gillanders B.M., Jones C.M., Limburg K.E., Secor D.H., Thorrold S.R., Walther B.D., 2008, Otolith chemistry to describe movements and life-history parameters of fishes: Hypotheses assumptions limitations and inferences. Oceanogr. Mar. Biol. Ann. Rev. 46.
Fablet, R., Daverat, F., de Pontual, H., 2007, Unsupervised Bayesian reconstruction of individual life histories from otolith signatures: case study of Sr:Ca transects of European eel (Anguilla anguilla) otoliths. Can. J. Fish. Aquat. Sci. 64, 152–165. CrossRef
FAO, 2002, Report and documentation of the International Workshop on Factors Contributing to Unsustainability and Overexploitation in Fisheries. Bangkok, 4–8 February 2002. FAO Fish. Rep. No. 672.
FAO, 2004, The state of the world fisheries and aquaculture 2004.
FAO, 2005, Putting into practice the ecosystem approach to fisheries.
Fromentin, J.-M., 2009, Lessons from the past: investigating historical data from bluefin tuna fisheries. Fish Fish. 10, 197–216. CrossRef
Fromentin, J.-M., Powers, J.E., 2005, Atlantic bluefin tuna: population dynamics, ecology, fisheries and management. Fish Fish. 6, 281–306. CrossRef
Fromentin, J.-M., Ravier, C., 2005, The East Atlantic and Mediterranean bluefin tuna stock: looking for sustainability in a context of large uncertainties and strong political pressures. Bull. Mar. Sci. 76, 353–362.
Fromentin J.-M., Planque B., Thébaud O., 2007, L'approche écosystémique des pêches: quelles priorités pour la recherche ? The ecosystem approach to fisheries: What are the research priorities? Ifremer Report.
Garcia, S., Grainger, J.R., 2005, Gloom and doom? The future of marine capture fisheries. Phil. Trans. R. Soc. B 360, 21-46. CrossRef
Garcia, S.M., Zerbi, A., Aliaume, C., Do Chi, T., Lasserre, G. 2003, The ecosystem approach to fisheries. FAO Fish. Tech. Pap. 443.
Gaspar, P., Georges, J.-Y., Fossette, S., Lenoble, A., Ferraroli, S., Le Maho, Y., 2006, Marine animal behaviour: neglecting ocean currents can lead us up the wrong track. Proc. R. Soc. 273, 2697–2702. CrossRef
Gillanders, B.M., 2002, Connectivity between juvenile and adult fish populations: do adults remain near their recruitment estuaries? Mar. Ecol. Prog. Ser. 240, 215–223. CrossRef
Goetz, F.W., MacKenzie, S., 2008, Functional genomics with microarrays in fish biology and fisheries. Fish Fish. 9, 378–395. CrossRef
Goodnight, K.F., Queller, D.C., 1999, Computer software for performing likelihood tests of pedigree relationship using genetic markers. Mol. Ecol. 8, 1231–1234. CrossRef
Guinand, B., Scribner, K.T., 2003, Evaluation of methodology for detection of genetic bottlenecks: inferences from temporally replicated lake trout populations. C.R. Biol. 326, 61–67. CrossRef
Gunn J., Block B.A., 2001, Advances in acoustic archival and satellite tagging of tunas. In: Block B.A. Stevens E.D. (Eds.) Tuna. Physiology ecology and evolution. Academic Press San Diego, pp. 167–224.
Hartl D.L., Clark A.G., 1997, Principles of population genetics. Sinauer Associates Sunderland MA, USA.
Hauser, L., Adcock, G.J., Smith, P.J., Ramirez, J.H.B., Carvalho, G.R., 2002, Loss of microsatellite diversity and low effective population size in an overexploited population of New Zealand snapper (Pagrus auratus). Proc. Nat. Acad. Sci. US 99, 11742–11747. CrossRef
Hauser, L., Carvalho, G.R., 2008, Paradigm shifts in marine fisheries genetics: ugly hypotheses slain by beautiful facts. Fish Fish. 9, 333–362. CrossRef
Hedgecock D., 1994, Does variance in reproductive success limit effective population sizes of marine organisms? In: Beaumont A.R. (Ed.) Genetics and Evolution of Aquatic Organisms. Chapman and Hall, pp. 122–134.
Hilborn R., Orensanz J., Parma A., 2005. Institutions incentives and the future of fisheries. Phil. Trans. R. Soc. B 360, 47–57.
Hilborn, R., Quinn, T.P., Schindler, D.E., Rogers, D.E., 2003, Biocomplexity and fisheries sustainability. Proc. Nat. Acad. Sci. US 100, 6564–6568. CrossRef
Hilborn R. Walters C.J., 1992, Quantitative fisheries stock assessment. Choice dynamics and uncertainty. Chapman & Hall New-York.
Hoarau, G., Boon, E., Jongma, D.N., Ferber, S., Palsson, J., Van der Veer, H.W., Rijnsdorp, A.D., Stam, W.T., Olsen, J.L., 2005, Low effective population size and evidence for inbreeding in an overexploited flatfish plaice (Pleuronectes platessa L.). Proc. R. Soc. B: Biol. Sci. 272, 497–503. CrossRef
Hoie, H. Folkvord, A. Otterlei, E., 2003, Effect of somatic and otolith growth rate on stable isotopic composition of early juvenile cod (Gadus morhua L.) otoliths. J. Exp. Mar. Biol. Ecol. 289, 41–58. CrossRef
Hoie, H., Otterlei, E., Folkvord, A., 2004, Temperature-dependent fractionation of stable oxygen isotopes in otoliths of juvenile cod (Gadus morhua L.). ICES J. Mar. Sci. 61, 243–251. CrossRef
Holland, K.N., Brill, R.W., Chang, R.K.C., Sibert, J.R., Fournier, D.A., 1992, Physiological and behavioural thermoregulation in bigeye tuna (Thunnus obesus). Nature 358, 410–412. CrossRef
Holland, K.N., Kajiura, S.M., Itano, D.G., Sibert, J.R., 2001, Tagging techniques can elucidate the biology and exploitation of aggregated pelagic species. Am. Fish. Soc. Symp. 25, 211–218.
Hutchinson, W.F., Carvahlo, G.R., Rogers, S.I., 2001, Marked genetic structuring in localised spawning populations of cod Gadus morhua in the North Sea and adjoining waters as revealed by microsatellites. Mar. Ecol. Progr. Ser. 223, 251–260. CrossRef
Hutchinson, W.F., van Oosterhout, C., Rogers, S.I., Carvalho, G.R., 2003, Temporal analysis of archived samples indicates marked genetic changes in declining North Sea cod (Gadus morhua). Proc. R. Soc. B, Biol. Sci. 270, 2125–2132.
Ivany, L.C., Patterson, W.P., Lohmann, K.C., 2000, Cooler winters as a possible cause of mass extinctions at the eocene/oligocene boundary. Nature 407, 887–890. CrossRef
Kalish, J.M., 1991, C-13 and O-18 isotopic disequilibria in fish otoliths - metabolic and kinetic effects. Mar. Ecol. Prog. Ser. 75, 191–203. CrossRef
Kalish, J.M., 1992, Formation of a stress-induced chemical check in fish otoliths. J. Exp. Mar. Biol. Ecol. 162, 265–277. CrossRef
Kalman, R., 1960, A new approach to linear filtering and prediction problems. Trans. Am. J. Bas. Eng. 82, 35–45. CrossRef
Kennedy, B.P., Blum, J.D., Folt, C.L., Nislow, K.H., 2000, Using natural strontium isotopic signatures as fish markers: methodology and application. Can. J. Fish. Aquat. Sci. 57, 2280–2292. CrossRef
Kitagawa, T., Sartimbul, A., Nakata, H., Kimura, S., Yamada, H., Nitta, A., 2006, The effect of water temperature on habitat use of young Pacific bluefin tuna Thunnus orientalis in the East China Sea. Fish. Sci. 72, 1166–1176. CrossRef
Kooijman S.A.L.M., 2000, Dynamic energy and mass budgets in biological systems. Cambridge University Press.
Lacroix, G.L., McCurdy, P., 1996, Migratory behaviour of post-smolt Atlantic salmon during initial stages of seaward migration. J. Fish Biol. 49, 1086–1101. CrossRef
Larkin, P.A., 1996, Concepts and issues in marine ecosystem management. Rev. Fish Biol. Fish. 6, 139–164. CrossRef
Lebreton, J.D., Burnham, K.P., Clobert, J., Anderson, D.R., 1992, Modelling survival and biological hypotheses using marked animals: a unified approach with case studies. Ecol. Monogr. 62, 67–118. CrossRef
Lemaire, C., Versini, J., Bonhomme, F., 2005, Maintenance of genetic differentiation across a transition zone in the sea: discordance between nuclear and cytoplasmic markers. J. Evol. Biol. 18, 70–80. CrossRef
Lions J.L., 1971, Optimal control of systems governed by partial differential equations. Springer-Verlag.
Lukacs, P.M., Burnham, K.P., 2005, Review of capture-recapture methods applicable to noninvasive genetic sampling. Mol. Ecol. 14, 3909–3919. CrossRef
Lutcavage, M., Brill, R.W., Skomal, G.B., Chase, B.C., Howey, P.W., 1999, Results of pop-up satellite tagging of spawning size class fish in the Gulf of Maine: do North Atlantic bluefin tuna spawn in the mid-Atlantic? Can. J. Fish. Aquat. Sci. 56, 173–177. CrossRef
Lynch, M., Ritland, K., 1999, Estimation of pairwise relatedness with molecular markers. Genetics 152, 1753–1766.
Miller, C.R., Joyce, P., Waits, L.P., 2005, A new method for estimating the size of small populations from genetic mark-recapture data. Mol. Ecol. 14, 1991–2005. CrossRef
Morin P.A., Luikart G., Wayne R.K., group T.S.W, 2004. SNPs in ecology evolution and conservation. Trends Ecol. Evol. 19, 208–216.
Mowat, G., Paetkau, D., 2002, Estimating marten Martes americana population size using hair capture and genetic tagging. Wildlife Biol. 8, 201–209.
Musyl, M.K., Brill, R.W., Boggs, C.H., Curran, D.S., Kazama, T.K., Seki, M.P., 2003, Vertical movements of bigeye tuna (Thunnus obesus) associated with islands buoys and seamounts near the main Hawaiian Islands from archival tagging data. Fish. Oceanogr. 12, 152–169. CrossRef
Neff, B.D., 2001, Genetic paternity analysis and breeding success in bluegill sunfish (Lepomis macrochirus). J. Hered. 92, 111–119. CrossRef
Nei, M., 1973, Analysis of gene diversity in subdivided populations. Proc. Nat. Acad. Sci. US 70, 3321–3323. CrossRef
Nei, M., 1978, Estimation of average heterozygosity and genetic distance from small number of individuals. Genetics 89, 583–590.
Nielsen, A., Sibert, J.R., 2007, State-space model for light-based tracking of marine animals. Can. J. Fish. Aquat. Sci. 64, 1055–1068. CrossRef
Nielsen, E.E., Hansen, M.M., Schmidt, C., Meldrup, D., Gronkjaer, P., 2001, Fisheries: population of origin of Atlantic cod. Nature 413, 272. CrossRef
Nielsen, E.E., Nielsen, P.H., Meldrup, D., Hansen, M.M., 2004, Genetic population structure of turbot (Scophthalmus maximus L.) supports the presence of multiple hybrid zones for marine fishes in the transition zone between the Baltic Sea and the North Sea. Mol. Ecol. 13, 585–595. CrossRef
O'Reilly, P.T., Canino, M.F., Bailey, K.M., Bentzen, P., 2004, Inverse relationship between FST and microsatellite polymorphism in the marine fish walleye pollock (Theragra chalcogramma): implications for resolving weak population structure. Mol. Ecol. 13, 1799–1814. CrossRef
Østergaard, S., Hansen, M.M., Loeschcke, V., Nielsen, E.E., 2003, Long-term temporal changes of genetic composition in brown trout (Salmo trutta L.) populations inhabiting an unstable environment. Mol. Ecol. 12, 3123–3135. CrossRef
Palsbøll, P.J., 1999, Genetic tagging: contemporary molecular ecology. Biol. J. Linn. Soc. 68, 3–22. CrossRef
Palsbøll, P.J., Allen, J., Bérubé, M., Clapham, P.J., Feddersen, T.P., Hammondk, P.S., Hudson, R.R., Jørgensen, H., Katona, S., Larsen, A.H., Larsen, F., Lien, J., Mattila, D.K., Sigurjonnsson, J., Sears, R., Smith, T., Sponer, R., Stevick, P., Øien, N., 1997, Genetic tagging of humpback whales. Nature 388, 767–769. CrossRef
Palsbøll, P.J., Bérubé, M., Allendorf, F.W., 2007, Identification of management units using population genetic data. Trends Ecol. Evol. 22, 11–16. CrossRef
Pauly, D., Christensen, V., Dalsgaard, J., Froese, R., Torre, F.C. Jr, 1998, Fishing down marine food webs. Science 279, 860–863. CrossRef
Pérez-Ruzafa, Á., González-Wangüemert, M., Lenfant, P., Marcos, C., García-Charton, J.A., 2006, Effects of fishing protection on the genetic structure of fish populations. Biol. Conserv. 129, 244–255. CrossRef
Petit, E., Valiere, N., 2006, Estimating population size with noninvasive capture-mark-recapture data. Conserv. Biol. 20, 1062–1073. CrossRef
Pollock, K.H., 2000, Capture-recapture models. Am. Stat. Assoc. 95, 293–296. CrossRef
Porch, C.E., 2005, The sustainability of Western Atlantic bluefin tuna: a warm blooded fish in a hot blooded fishery. Bull. Mar. Sci. 76, 363–384.
Prince, E.D., Goodyear, C.P., 2006, Hypoxia-based habitat compression of tropical pelagic fishes. Fish. Oceanogr. 15, 451–464. CrossRef
Queller, D.C., Goodnight, K.F., 1989, Estimating relatedness using genetic markers. Evolution 43, 258–275. CrossRef
Ramstad, K.M., Woody, C.A., Sage, G.K., Allendorf, F.W., 2004, Founding events influence genetic population structure of sockeye salmon (Oncorhynchus nerka) in Lake Clark Alaska. Mol. Ecol. 13, 277–290. CrossRef
Ritland, K., 1996, A marker-based method for inferences about quantitative inheritance in natural populations. Evolution 50, 1062–1073. CrossRef
Ritland, K., 2000, Marker-inferred relatedness as a tool for detecting heritability in nature. Mol. Ecol. 9, 1195–1204. CrossRef
Romanek, C.S., Gauldie, R.W., 1996, A predictive model of otolith growth in fish based on the chemistry of the endolymph. Comp. Bioch. Physiol. Part A: Physiol. 114, 71–79. CrossRef
Rooker, J.R., Secor, D.H., DeMetrio, G., Schloesser, R., Block, B.A., Neilson, J.D., 2008, Natal homing and connectivity in Atlantic bluefin tuna populations. Science 322, 742–744. CrossRef
Rooker, J.R., Secor, D.H., Zdanowicz, V.S., De Metrio, G., Orsi-Relini, L., 2003, Identification of Atlantic bluefin tuna (Thunnus thynnus) stocks from putative nurseries using otolith chemistry. Fish. Oceanogr. 12, 75–84. CrossRef
Royer, F., Fromentin, J.-M., Gaspar, P., 2005, A state/space model to derive bluefin tuna movement and habitat from archival tags. Oikos 109, 473–484. CrossRef
Ruzzante, D.E., Mariani, S., Bekkevold, D., André, C., Mosegaard, H., Clausen, L.A., Dahlgren, T.G., Hutchinson, W.F., Hatfield, E.M.C., Torstensen, E., Brigham, J., Simmonds, E.J., Laikre, L., Larsson, L.C., Stet, R.J.M., Ryman, N., Carvahlo, G.R., 2006, Biocomplexity in a highly migratory pelagic marine fish Atlantic herring. Proc. R. Soc. B: Biol. Sci. 273, 1459–1464. CrossRef
Saenz-Agudelo, P., Jones, G.P., Thorrold, S.R., Planes, S., 2009, Estimating connectivity in marine populations: an empirical evaluation of assignment tests and parentage analysis under different gene flow scenarios. Mol. Ecol. 18, 1765–1776. CrossRef
Schwartz, M.K., Luikart, G., Waples, R.S., 2007, Genetic monitoring as a promising tool for conservation and management. Trends Ecol. Evol. 22, 25–33. CrossRef
Secor, D.H., 2000, Longevity and resilience of Chesapeake Bay striped bass. ICES J. Mar. Sci. 57, 808–815. CrossRef
Sibert J.R., 2001, Electronic tagging and tracking in marine fisheries: introduction to the proceedings. In: Sibert J.R. Nielsen J.L. (Eds.) Electronic tagging and tracking in marine fisheries. Kluwer Academic Publishers Dordrecht, pp. 1–6.
Sibert J.R., Fournier D.A., 2001, Possible models for combining tracking data with conventional tagging data. In: Sibert J.R. Nielsen J.L. (Eds.) Electronic tagging and tracking in marine fisheries. Kluwer, Dordrecht, pp. 443–456.
Sibert J.R., Lutcavage M.E., Nielsen A., Brill R.W., Wilson S.G., 2006. Interannual variation in large-scale movement of Atlantic bluefin tuna (Thunnus thynnus) determined from pop-up satellite archival tags. Can. J. Fish. Aquat. Sci. 63, 2154–2166.
Sims, D.W., Southall, E.J., Humphries, N.E., Hays, G.C., Bradshaw, C.J.A., Pitchford, J.W., James, A., Ahmed, M.Z., Brierley, A.S., Hindell, M.A., Morritt, D., Musyl, M.K., Righton, D., Shepard, E.L.C., Wearmouth, V.J., Wilson, R.P., Witt, M.J., Metcalfe, J.D., 2008, Scaling laws of marine predator search behaviour. Nature 451, 1098–1102. CrossRef
Slatkin, M., 1995, A measure of population subdivision based on microsatellite allele frequencies. Genetics 139, 457–462.
Tsukamoto, K., Nakai, I., Tesch, W.V., 1998, Do all freshwater eels migrate? Nature 396, 635–636. CrossRef
Turner, T.F., Wares, J.P., Gold, J.R., 2002, Genetic effective size is three orders of magnitude smaller than adult census size in an abundant estuarine-dependent marine fish (Sciaenops ocellatus). Genetics 162, 1329–1339.
Turrell W.R., 2004, The policy basis of the “ecosystem approach” to fisheries management. EuroGGOS publ. 21.
Voegeli, F.A., Smale, M.J., Webber, D.M., Andrade, Y., O'Dor, R.K., 2001, Ultrasonic telemetry tracking and automated monitoring technology for sharks. Environ. Biol. Fish. 60, 267–281. CrossRef
Wang, J., 2002, An estimator for pairwise relatedness using molecular markers. Genetics 160, 1203–1215.
Waples, R.S., 2002, Effective size of fluctuating salmon populations. Genetics 161, 783–791.
Waples, R.S., Punt, A.E., Cope, J.M., 2008, Integrating genetic data into management of marine resources: how can we do it better? Fish Fish. 9, 423–449. CrossRef
Willis, J., 2008, Simulation model of universal law of school size distribution applied to southern bluefin tuna (Thunnus maccoyii) in the Great Australian Bight. Ecol. Model. 213, 33–44. CrossRef
Woods, J.G., Paetkau, D., Lewis, D., McLellan, B.N., Proctor, M., Strobeck, C., 1999, Genetic tagging of free-ranging black and brown bears. Wildlife Soc. Bull. 27, 616–627.
Wright, S., 1938, Size of population and breeding structure in relation to evolution. Science 87, 430–431.
Wright, S., 1951, The genetical structure of populations. Ann. Eugen. 15, 323–354. CrossRef