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Population network structures, graph theory, algorithms to match subgraphs may lead to better clustering of households and communities in epidemiological studies: a response

Published online by Cambridge University Press:  10 January 2020

A. Trickey*
Affiliation:
Population Health Sciences, University of Bristol, Bristol, UK National Institute of Health Research (NIHR) Health Protection Research Unit (HPRU) in Evaluation of Interventions at the University of Bristol, Bristol, UK
A. Sood
Affiliation:
Dayanand Medical College, Civil lines, Tagore Nagar, Ludhiana, Punjab, India
V. Midha
Affiliation:
Dayanand Medical College, Civil lines, Tagore Nagar, Ludhiana, Punjab, India
W. Thompson
Affiliation:
Centers for Disease Control and Prevention, Atlanta, GA, USA
C. Vellozzi
Affiliation:
Centers for Disease Control and Prevention, Atlanta, GA, USA
S. Shadaker
Affiliation:
Centers for Disease Control and Prevention, Atlanta, GA, USA
V. Surlikar
Affiliation:
MSD India Pvt. Ltd., Mumbai, India
S. Kanchi
Affiliation:
MSD India Pvt. Ltd., Mumbai, India
P. Vickerman
Affiliation:
Population Health Sciences, University of Bristol, Bristol, UK National Institute of Health Research (NIHR) Health Protection Research Unit (HPRU) in Evaluation of Interventions at the University of Bristol, Bristol, UK
M. T. May
Affiliation:
Population Health Sciences, University of Bristol, Bristol, UK National Institute of Health Research (NIHR) Health Protection Research Unit (HPRU) in Evaluation of Interventions at the University of Bristol, Bristol, UK
F. Averhoff
Affiliation:
Centers for Disease Control and Prevention, Atlanta, GA, USA
*
Author for correspondence: A. Trickey, E-mail: adam.trickey@bristol.ac.uk
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Abstract

Type
Letter to the Editor
Creative Commons
Creative Common License - CCCreative Common License - BY
This is an Open Access article, distributed under the terms of the Creative Commons Attribution licence (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted re-use, distribution, and reproduction in any medium, provided the original work is properly cited.
Copyright
Copyright © The Author(s) 2020. Published by Cambridge University Press

We would like to thank Professor Rao for his letter describing the graphical structure of clustering through networks [Reference Rao1]. We agree that network structure data are a useful way to understand the patterns of transmission. When combined with mathematical modelling, these methods also allow for measuring the effect of interventions such as by Metzig et al. when looking at the transmission of hepatitis C virus (HCV) among networks of people who inject drugs (PWID) [Reference Metzig2]. Adding attribute-level information to each vertex, as described in the letter by Professor Rao, is an interesting development to these network structures and could be of use for determining which attributes are associated with prevalent infections in certain circumstances.

Regarding our work examining clustering of prevalent HCV infections in a general population setting in Punjab state, India [Reference Trickey3], which used data from a seroprevalence survey [Reference Sood4], we do not believe the method described by Professor Rao would be applicable as we do not have detailed data on the social networks of the study participants. The method outlined would be ideal when investigating bloodborne infection patterns, such as HCV, among PWID. Globally, unsafe injecting practices among PWID are estimated to cause approximately 40% of ongoing HCV infections and are clearly an area in need of immediate attention [Reference Trickey5]. In settings with a high prevalence of injection drug use, the transmission is most likely to have occurred through the sharing of unsafe injecting equipment, but in more generalised epidemic settings such as Punjab, this is not the case due to other competing risks. For example, HCV transmission could occur between two people who share a particular medical practitioner using unsterilised equipment and therefore the two individuals may share few, if any, clearly defined social networks. In such circumstances, the use of network models would be highly complicated and would require very granular data that are usually unavailable.

We believe our study adds to the evidence base for factors associated with prevalent HCV infections in Punjab state, India, which can be of use for those setting up screening programmes. Specifically, our study found that clustering of HCV antibody positivity does occur within households. To validate this, we have subsequently investigated the 18 households containing ≥2 HCV-infected people, where at least two members had successful genotype tests. Of these households, 14 had two or more members with the same genotype. Punjab has a diverse genotype distribution, with 61% of those successfully tested in our survey having genotype 3, 28% genotype 1 and 11% genotype 4. The genotype distributions among the individuals from the households with multiple infections were not dissimilar to those of the overall sample (50% genotype 3, 28% genotype 1, 23% genotype 4). Considering the distribution of genotypes in this setting, where none completely dominates, we would expect to see more discordant genotypes in households if clustering was not occurring. This reinforces the recommendation that when an HCV-infected person is identified, testing of other members of the household would be prudent, as the risk of HCV infection is elevated for individuals in those households.

We agree with Professor Rao that both our current work as well as future work provide the potential to organise and collect data to develop more complex epidemiologic models. Due to reports indicating injecting drug use could be an important route of HCV transmission in Punjab [Reference Panda6, Reference Ambekar and Tripathi7], we advise those designing future studies among PWID in this setting to try to account for social network structure and apply the methods outlined in the letter by Professor Rao. The collection of high-quality empirical data is key to informing models.

References

1.Rao, A (2020) Population network structures, graph theory, algorithms to match subgraphs may lead to better clustering of households and communities in epidemiological studies. Epidemiology and Infection.Google Scholar
2.Metzig, C et al. (2017) Impact of hepatitis C treatment as prevention for people who inject drugs is sensitive to contact network structure. Scientific Reports 7, 1833.CrossRefGoogle ScholarPubMed
3.Trickey, A et al. (2019) Clustering of hepatitis C virus antibody positivity within households and communities in Punjab, India. Epidemiology and Infection 147, e283.CrossRefGoogle ScholarPubMed
4.Sood, A et al. (2018) The burden of hepatitis C virus infection in Punjab, India: a population-based serosurvey. PLoS ONE 13, e0200461.CrossRefGoogle ScholarPubMed
5.Trickey, A et al. (2019) The contribution of injection drug use to hepatitis C virus transmission globally, regionally, and at country level: a modelling study. Lancet Gastroenterology and Hepatology 4, 435444.CrossRefGoogle ScholarPubMed
6.Panda, S et al. (2014) Alarming epidemics of human immunodeficiency virus and hepatitis C virus among injection drug users in the northwestern bordering state of Punjab, India: prevalence and correlates. International Journal of STD and AIDS 25, 596606.CrossRefGoogle ScholarPubMed
7.UNAIDS, Ambekar, A and Tripathi, B (2008) Size Estimation of Injecting Drug Use in Punjab and Haryana. New Delhi, India: UNAIDS.Google Scholar