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4 - The Bootstrap

Published online by Cambridge University Press:  09 December 2009

Derek A. Roff
Affiliation:
University of California, Riverside
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Summary

Introduction

In Chapter 3, I introduced the idea of using an observed distribution as a descriptor of a hypothetical distribution in order to test the efficacy of a statistical method. The bootstrap method takes a similar approach, in that it attempts to generate point estimates and confidence limits by taking random samples from the observed distribution. The underlying rationale behind the method is that the observed distribution is itself an adequate descriptor of the true distribution. The term bootstrap was given by Efron (1979) and derives from the saying “to pull oneself up by one's bootstraps,” which refers to accomplishing something seemingly impossible by one's own efforts (supposedly from the book Adventures of Baron Munchausen by Rudolph Erich Raspe, though I have not been able to find the incident in my copy).

Suppose that our observed data consisted of a huge number of observations: in this case, it is clear that sampling from this distribution is equivalent to sampling from the original distribution. Herein lies the rub – if the sample is not huge then the observed distribution might be a poor descriptor. This is particularly true if the statistic to be estimated is very sensitive to outliers and the underlying distribution is skewed. The hope by many that a sample as small as 20 observations is an adequate representation of the underlying distribution is probably folly in the extreme (I have seen bootstrapping on samples as small as five, which is getting somewhat absurd).

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Publisher: Cambridge University Press
Print publication year: 2006

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References

Davison, A. C. and Hinkley, D. V. (1999). Bootstrap Methods and their Applications. Cambridge: Cambridge University Press.Google Scholar
Efron, B. (1982). The Jackknife, the Bootstrap and Other Resampling Plans. Society for Industrial and Applied Mathematics, Philadelphia.CrossRefGoogle Scholar
Efron, B. and Tibshirani, R. J. (1993). An Introduction to the Bootstrap. New York: Chapman and Hall.CrossRefGoogle Scholar
Manly, B. F. J. (1997). Randomization, Bootstrap and Monte Carlo Methods in Biology. New York: Chapman and Hall.Google Scholar
Mooney, C. Z. and Duval, R. D. (1993). Bootstrapping: A nonparametric approach to statistical inference. Newbury Park: Sage Publications.CrossRefGoogle Scholar

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  • The Bootstrap
  • Derek A. Roff, University of California, Riverside
  • Book: Introduction to Computer-Intensive Methods of Data Analysis in Biology
  • Online publication: 09 December 2009
  • Chapter DOI: https://doi.org/10.1017/CBO9780511616785.005
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  • The Bootstrap
  • Derek A. Roff, University of California, Riverside
  • Book: Introduction to Computer-Intensive Methods of Data Analysis in Biology
  • Online publication: 09 December 2009
  • Chapter DOI: https://doi.org/10.1017/CBO9780511616785.005
Available formats
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To save content items to your account, please confirm that you agree to abide by our usage policies. If this is the first time you use this feature, you will be asked to authorise Cambridge Core to connect with your account. Find out more about saving content to Google Drive.

  • The Bootstrap
  • Derek A. Roff, University of California, Riverside
  • Book: Introduction to Computer-Intensive Methods of Data Analysis in Biology
  • Online publication: 09 December 2009
  • Chapter DOI: https://doi.org/10.1017/CBO9780511616785.005
Available formats
×