Animal Science, Volume 73 - August 2001
- This volume was published under a former title. See this journal's title history.
Invited paper
Technical review of the energy and protein requirements of growing pigs: protein
- C.T. Whittemore, D.M. Green, P.W. Knap
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- 18 August 2016, pp. 363-373
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A review of work reported in the literature was used to present quantitative descriptions of protein use in the growing pig. These are detailed in the text, which also points to preferred values, and to anomalies and lacunae. The review was prepared with the objective of allowing from its content the inclusive and quantitative modelling of amino acid requirement. Requirement was approached as the sum of the component factors: maintenance and protein retention. Ileal true digestible protein and amino acid requirements are presented in a form consistent with that forwarded for energy. Thus both energy and protein elements can be conceptualized within a single coherent framework. Priority uses for absorbed amino acids were assumed to be (a) to support endogenous protein losses resultant from the passage of food and incomplete re-absorption prior to the terminal ileum, (b) to replace lost hair and skin, and (c) to cover the basic maintenance losses which will occur as a result of minimal protein turn-over even when protein retention is zero. The bulk of the protein requirement was directly linked to the daily rate of protein retention, for which the linear-plateau response was accepted. For determination of the maximum rate of protein retention the Gompertz function was proposed, although the use of a single value throughout the growth period was not dismissed. The balance of amino acids for protein retention is specified as different from that for maintenance. Central to the approach was the proposal that the inefficiency of use of ileal digested ideal protein, even when not supplied in excess, was an expression of protein losses occurring as a result of protein turn-over. The requirement for the satisfaction of the losses from protein turn-over occurring as a consequence of protein retention, and therefore additional to the requirements for maintenance, was identified. Quantification was attempted with sufficient success to warrant its inclusion into requirement estimation. It was concluded that this element addressed previously inadequately explained protein utilization inefficiencies. Algorithms are presented based upon protein turn-over which appear to be consistent with empirical findings.
Technical review of the energy and protein requirements of growing pigs: energy
- C. T. Whittemore, P. W. Knap, D. M. Green
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- 18 August 2016, pp. 199-215
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A review of work reported in the literature was used to present quantitative descriptions of energy dispositioning in the growing pig. These are detailed in the text, which points to preferred values, as well as to anomalies and lacunae. The review was prepared with the objective of allowing from its content the inclusive and quantitative modelling of energy requirement. Requirement is approached as the sum of the component factors; maintenance, protein retention and lipid retention. Conventional expressions of maintenance requirement, as some function of pig mass, were found unconvincing in their variety of expression of coefficients and exponents. The review concluded that maintenance is properly related to protein turn-over, and thereby requires at least to include elements of concomitant protein metabolic activity. It was also judged that maintenance costs might be farm-specific. The energy requirements for activity, gaseous losses and disease were identified as important, but unsatisfactory in their quantification. Exploration of the energy costs of uncomfortable ambient temperatures suggested that whilst the responses of the pig are open to sophisticated and relatively exact calculation, the description of comfort remained inexact. The efficiency of retention of lipid by direct incorporation was high and may comprise a substantial proportion of the dietary lipid supply. There was little evidence of variation in the efficiency of utilization of metabolizable energy from carbohydrate for lipid retention. The linear-plateau paradigm for protein retention was adopted. The efficiency of utilization of energy for protein retention measured by a variety of approaches was found to be highly variable, prone to error and the literature confused. It was concluded that the efficiency of use of metabolizable energy for protein retention would be a function of at least: (a) the absorbed substrate being metabolized for the synthesis of body protein, (b) the rate of total protein tissue turn-over associated with the retention of newly accreted protein and not already accounted in the estimate of maintenance, (c) the mass of protein tissue involved in turn-over, and (d) the degree of maturity attained, and any influence maturity may have upon the rate of turn-over of total body protein. Algorithms for energy requirement are presented based upon protein turn-over and these appear to have some consistency with empirical findings.
Technical review of the energy and protein requirements of growing pigs: food intake
- C. T. Whittemore, D. M. Green, P. W. Knap
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- 18 August 2016, pp. 3-17
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Food intake in pigs is highly variable across different production circumstances. This report concludes from a critical review of published observations that it was unrealistic to expect from the scientific literature purporting to express nutrient requirement any reasonable prediction of the particular food intake of groups of pigs. None the less, such knowledge is essential for the practical purposes of their day-to-day nutrition. The literature does however yield general principles from which may be derived: (a) the likely forms (but not the parameter values) of intake functions relating food intake to pig live weight; and (b) the likely factors involved in the modulation of food intake at any given live weight. Using these principles two methods for determining on-farm food intake from the use of simple and available records were proposed. The first requires knowledge only of start and final weight, the time elapsed, and total food intake: it involves two steps, the determination of a suitable growth curve followed by the fitting of a suitable food intake curve. The second method is appropriate in the absence of information on total food intake, and requires a minimum number of spot measurements through the growth period. Different functions were tested for the curve of best fit. As a further benefit it appeared that models could be constructed from the information presented that would speculate for diagnostic purposes upon the likely modulators of food intake. Such models could explore the constraints of gut capacity, the energetic requirements of maintenance and potential growth, the influence of excessive or inadequate environmental temperature, the quality of housing and stocking density.
Breeding and genetics
Population structure, inbreeding trend and their association with hip and elbow dysplasia in dogs
- K. Mäki, A. F. Groen, A.-E. Liinamo, M. Ojala
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- 18 August 2016, pp. 217-228
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The aims of this study were to examine population structure and inbreeding trend in six dog breeds in Finland and to assess the inbreeding depression for hip and elbow dysplasia. Data consisted of 289 569 dogs, of which 36 924 dogs also had a record for hip and/or elbow dysplasia screening. From the early 1980s onwards, inbreeding trends were decreasing in the Golden Retriever, the Labrador Retriever, the Rough Collie and the Rottweiler, probably as a result of importations of dogs, and somewhat increasing in the Finnish Hound and the German Shepherd. When analysed per generation, observed mean inbreeding coefficients were higher than the expected ones in each breed, indicating that breeders have not actively avoided inbreeding. As a class effect, the inbreeding level was significant only for hip dysplasia in the Labrador Retriever and the German Shepherd breeds. As a regression, inbreeding level of a dog had only a minor effect on both of the dysplasias. Hip dysplasia in the Labrador Retriever appeared to be more influenced by longer term aggregation of homozygosity (long-term inbreeding) in animals than by shorter-term inbreeding. When analysed from two data sets with a minimum of five and two ancestral generations for each dog in the data, a statistically significant association between hip dysplasia and inbreeding for the Labrador Retriever could be detected only in the former data set.
Genetic variation for resistance to clinical and subclinical diseases exists in growing pigs
- M. Henryon, P. Berg, J. Jensen, S. Andersen
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- 18 August 2016, pp. 375-387
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The objective of this study was to test that genetic variation for resistance to clinical and subclinical diseases exists in growing pigs. A total of 13 551 male growing pigs were assessed for resistance to five categories of clinical and subclinical disease: (i) any clinical or subclinical disease, (ii) lameness, (iii) respiratory diseases, (iv) diarrhoea, and (v) other diseases (i.e. any clinical or subclinical disease with the exception of (ii), (iii), and (iv)). Additive genetic variation for resistance to each disease category was estimated by fitting a Weibull, sire-dam frailty model to time until the pigs were first diagnosed with a disease from that category. Genetic correlations among the resistances to each disease category were approximated as product-moment correlations among predicted breeding values of the sires. Additive genetic variation was detected for resistance to (i) any clinical or subclinical disease (additive genetic variance for log-frailty (± s.e.) = 0·18 ± 0·05, heritability on the logarithmic-time scale = 0·10), (ii) lameness (0·29 ± 0·11, 0·16), (iii) respiratory diseases (0·24 ± 0·16, 0·12), (iv) diarrhoea (0·30 ± 0·27, 0·16), and (v) the other diseases (0·34 ± 0·15, 0·19) and there were generally positive and low-to-moderate correlations among the predicted breeding values (-0·03 to + 0·65). These results demonstrate that additive genetic variation for resistance to clinical and subclinical diseases does exist in growing pigs, and suggests that selective breeding for resistance could be successful.
Genetic and economic relationships between somatic cell count and clinical mastitis and their use in selection for mastitis resistance in dairy cattle
- H. N. Kadarmideen, J. E. Pryce
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- 18 August 2016, pp. 19-28
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Clinical mastitis (CM) and monthly test-day somatic cell count (SCC) records on Holstein cows were used to investigate the genetic and economic relationship of lactation average (of natural logarithms of) monthly test-day SCC (LSCC) with CM. After editing, there were 23663 lactation records on 17937 cows from 257 herds. Three groups of herds were first identified as having low (L), medium (M) and high (H) incidences of CM from the original or pooled (P) data set. Genetic parameters were estimated for the original and three data sub-sets (derived from the three herd groups). Expected genetic responses to selection against CM were calculated using genetic parameters of each data set separately, with an adapted version of the UK national index (£PLI-profitable lifetime index). Indirect economic values of SCC (EVSCC) were calculated as the direct cost of CM per cow per lactation weighted by the genetic regression coefficient of CM lactation records on their sires’ predicted transmitting ability for SCC (PTASCC). All genetic regression analyses were based on linear and threshold-liability models. Heritabilities and repeatabilities, respectively, were 0034 and 0·111 for CM and 0120 and 0·347 for LSCC in the original data set. Genetic, permanent environmental, residual and phenotypic correlations between CM and LSCC for the original (pooled) data set were 0·70, 0·44, 013 and 0·20, respectively. Parameter estimates for the three herd groups differed, with magnitude of the estimates increasing with increase in incidence from L to H herd groups. The EVSCC per unit of PTASCC for L, M, H and P herd groups, respectively, were £004, £0·15, £0·33 and £018 on the observed and £0·86, £0·96, £1·22 and £110 on the underlying-liability scales. Selection for mastitis resistance, using SCC as an indicator trait in an extended version of £PLI, resulted in a selection response of 0·9, 21, 1·7 and 1·9 more cases per 100 cows after 10 years of selection in L, M, H and P herd groups, respectively. These results suggest that genetic responses to selection for CM resistance as well as the EVSCC are specific to herd incidence and hence would be appropriate for customized selection indexes. The increase in CM cases was greater when CM was excluded from the £PLI (2·8 v 1·9), hence it is recommended that CM should be included in the breeding goal in order to arrest further decline or to make improvement in genetic resistance to clinical mastitis.
Inheritance of faecal egg counts during early lactation in Scottish Blackface ewes facing mixed, natural nematode infections
- S.C. Bishop, M.J. Stear
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- 18 August 2016, pp. 389-395
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This paper presents an analysis of nematode faecal egg counts from Scottish Blackface ewes facing mixed, natural nematode infections (predominantly Teladorsagia circumcincta). The data set comprised 1445 measurements on 421 ewes taken at 4 and 6 weeks post-lambing, over a 4-year period. The ewes, themselves, were the progeny of 73 sires and 285 dams. Only Strongyle eggs were consistently present, and faecal egg counts from this genera ranged from zero (0·4 of all measurements) to 3388 eggs per g. Faecal egg counts were significantly affected by the number of lambs reared and suckled (increasing reproductive burden led to higher counts) by ewe age (older ewes had lower counts) and by previous selection history (ewes from a line previously selected for increased carcass fatness had lower faecal egg counts than ewes from a conversely selected lean line). The heritability of log-transformed faecal egg counts was 0·23 (s.e. 005) and the repeatability, including both within- and between-year permanent environmental effects, was 0·25 (s.e. 004). The apparent presence or absence of infection had a heritability of 015 (s.e. 007) on the observed scale and 0·39 (s.e. 016) when analysed as a binomial threshold trait. The genetic correlation between average 4-week weight of lamb suckled by the ewe and faecal egg counts was 0·24 (s.e. 010). The results suggest that faecal egg counts during early lactation are heritable and influenced by the reproductive performance of the ewe. Selection to reduce nematode faecal egg output from ewes during this period should be successful in reducing pasture larval contamination.
Genetic evaluation of dairy bulls for energy balance traits using random regression
- M. P. Coffey, G. C. Emmans, S. Brotherstone
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- 18 August 2016, pp. 29-40
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Current selection objectives for dairy cattle breeding may be favouring cows that are genetically predisposed to mobilize body tissue. This may have consequences for fertility since cows may resume reproductive activity only once the nadir of negative energy balance (NEB) has passed. In this study, we repeatedly measured food intake, live weight, milk yield and condition score of Holstein cattle in their first lactation. They were given either a high concentrate or low concentrate diet and were either selected or control animals for genetic merit for kg milk fat plus milk protein. Orthogonal polynomials were used to model each trait over time and random regression techniques allowed curves to vary between animals at both the genetic and the permanent environmental levels. Breeding values for bulls were calculated for each trait for each day of lactation. Estimates of genetic merit for energy balance were calculated from combined breeding values for either (1) food intake and milk yield output, or (2) live weight and condition-score changes.
When estimated from daily fluxes of energy calculated from food intake and milk output, the average genetic merit of bulls for energy balance was approximately -15 MJ/day in early lactation. It became positive at about day 40 and rose to +18 MJ/day at approximately day 150. When estimated from body energy state changes the NEB in early lactation was also -15 MJ/day. It became positive at about day 80 and then rose to a peak of +10 MJ/day. The difference between the two methods may arise either because of the contribution of food wastage to intake measures or through inadequate predictions of body lipid from equations using live weight and condition score or a combination of both. Body energy mobilized in early lactation was not fully recovered until day 200 of lactation. The results suggest that energy balance may be estimated from changes in body energy state that can be calculated from body weight and condition score. Since body weight can be predicted from linear type measures, it may be possible to calculate breeding values for energy balance from national evaluations for production and type. Energy balance may be more suitable as a breeding objective than persistency.
Genetic parameters for clinical mastitis in Holstein-Friesians in the United Kingdom: a Bayesian analysis
- H. N. Kadarmideen, R. Rekaya, D. Gianola
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- 18 August 2016, pp. 229-240
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A Bayesian threshold-liability model with Markov chain Monte Carlo techniques was used to infer genetic parameters for clinical mastitis records collected on Holstein-Friesian cows by one of the United Kingdom’s national recording schemes. Four data sets were created to investigate the effect of data sampling methods on genetic parameter estimates for first and multi-lactation cows, separately. The data sets were: (1) cows with complete first lactations only (8671 cows); (2) all cows, with first lactations whether complete or incomplete (10 967 cows); (3) cows with complete multi-lactations (32 948 records); and (4) all cows with multiple lactations whether complete or incomplete (44 268 records). A Gaussian mixed linear model with sire effects was adopted for liability. Explanatory variables included in the model varied for each data set. Analyses were conducted using Gibbs sampling and estimates were on the liability scale. Posterior means of heritability for clinical mastitis were higher for first lactations (0·11 and 0·10 for data sets 1 and 2, respectively) than for multiple lactations (0·09 and 0·07, for data sets 3 and 4, respectively). For multiple lactations, estimates of permanent environmental variance were higher for complete than incomplete lactations. Repeatability was 0·21 and 0·17 for data sets 3 and 4, respectively. This suggests the existence of effects, other than additive genetic effects, on susceptibility to mastitis that are common to all lactations. In first or multi-lactation data sets, heritability was proportionately 0·10 to 0·19 lower for data sets with all records (in which case the models had days in milk as a covariate) than for data with only complete lactation records (models without days in milk as a covariate). This suggests an effect of data sampling on genetic parameter estimates. The regression of liability on days in milk differed from zero, indicating that the probability of mastitis is higher for longer lactations, as expected. Results also indicated that a regression on days in milk should be included in a model for genetic evaluation of sires for mastitis resistance based on records in progress.
Selection for high or low backfat depth in Coopworth sheep: breeding-ewe traits
- J. C. McEwan, C. A. Morris, P. F. Fennessy, G. J. Greer, W. E. Bain, S. M. Hickey
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- 18 August 2016, pp. 241-252
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A breeding experiment in Coopworth sheep where selection was applied to backfat depth was evaluated after 14 years (1981-94). There were three self-replacing lines, two selected for increased or decreased subcutaneous fat depth, and an unselected control (average size = 51 ewes per line per year). Reproductive traits, ewe body weight and ewe fleece weight were monitored in each line as potential correlated responses. In the last 4 years studied, the fat (F), control (C) and lean (L) lines differed significantly in the proportion of ewes lambing (0·87, 0·93, 0·94 respectively), litter size at birth (1·64, 1·83 and 1·89), and lamb survival up to weaning, unadjusted for birth rank and sex (0·88, 0·81 and 0·74). The overall reproductive trait, lambs weaned per ewe joined (1·22, 1·33 and 1·26), did not differ significantly among lines. From pre-mating weights of ewes present in 1993 or 1994, means for mature ewes by line were 60·1, 62·4 and 63·3 kg, respectively (P < 0·01). Means for weight at scanning time (7 months of age) by line, as a proportion of mature weight were: 0·533, 0·561 and 0·559, respectively (P < 0·05). There were also significant line differences in ewe fleece weights, with the 1993 and 1994 data averaging 3·93, 4·05 and 4·27 kg respectively (P < 0·01). For weight of lamb weaned per ewe weaning at least one lamb, the L line had a 0·09 higher mean proportionally than the F line (P < 0·05), but for a composite trait which was a weighted combination of weight of lambs weaned and ewe fleece weight per ewe joined (with or without allowance for different ewe live weights), the L line was no longer significantly different from the F line. Repeatabilities and single-record heritabilities were also estimated for various ewe traits. The implications are that lean-lamb selection would be associated with only small changes in net reproduction, ewe fleece weight and live weight, but larger differences would be expected from selection in the opposite direction.
Reproductive performance in Holstein-Friesian cows in relation to genetic merit and level of feeding when grazing pasture
- W. J. Fulkerson, J. Wilkins, R. C. Dobos, G. M. Hough, M. E. Goddard, T. Davison
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- 18 August 2016, pp. 397-406
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One hundred and eight Holstein-Friesian cows in six herds were run on six separate farmlets over a 5-year period from 1995 to 1999 at Wollongbar Agricultural Institute, on the subtropical north coast of New South Wales, Australia. Three of the herds comprised high genetic merit (HGM) cows — Australian breeding value (ABV) of +49·1 kg for milk fat (F) plus protein (Pr) and three herds comprised low genetic merit (LGM) cows-ABV of 2·3 kg. Within genetic merit groupings, one herd was given 0·34 t (l), one herd was given 0·84 t (m) and one herd 1·71 t (h), of concentrate per cow per lactation. Within each genetic merit group, cows were matched for milk yield and live weight, and over all groups for time of calving and age at the commencement of the study. The 30 paddocks within each farmlet were matched between farmlets for pasture type and pasture growth rate and soil fertility. Half the cows within each herd calved over a 3-month period in spring and the other half in autumn. Strict management criteria ensured that there was no bias towards particular treatment groups.
HGM cows were ‘open’ (days from calving to conception) for 8 days longer than the LGM cows (99 v. 91 days). The lHGM cows took 11 days longer to commence luteal phase activity and 21 days longer to first observed oestrus post calving than hLGM cows (P < 0·001), with the other groups being intermediate.
After 24 days of mating, 22% of lHGM cows were pregnant, and this was less than half of the rate of the best herd-mLGM. After 9 weeks of mating, the chances of an LGM cow being pregnant was 87% greater than an HGM cow. After 12 weeks of mating, 70% of lHGM cows were pregnant compared with a mean pregnancy rate of 87% for the LGM cows.
The number of cows treated for abnormal ovarian activity (anoestrus, cystic) was highest (P < 0·001) in the HGM herds given ‘l’ and ‘m’ levels of concentrate compared with the remaining herds (0·24 v. 0·12 treatments per cow mated, respectively).
There was a significant positive relationship between live-weight change from 4 weeks before, to the start of, the mating period and the chances of a cow being pregnant at 24 days (P < 0·05) and at 6 and 9 weeks after the commencement of mating.
There was a significant negative relationship (P < 0·001) between the change in daily F plus Pr yield, from the start to 4 weeks after mating began, and pregnancy rate at 9 weeks. The change in F plus Pr yield was +63 g/day for cows pregnant at nine weeks as opposed to +154 g/day for cows not pregnant.
The results of the present study indicate that the reproductive performance of HGM cows, with a mean of 61% North American (NA) genes, is lower than LGM cows (22% NA genes) under a predominantly pasture-based system of farming. The influence on reproduction was possibly due to genes favouring partitioning of energy to milk yield rather than body-condition maintenance in the HGM cows and when food intake was inadequate, then being more willing to use body reserves.
These reproductive problems may be reduced by more intensive reproductive management. However, such practices are costly and time consuming. Another approach may be to ensure that live-weight loss over the mating period is minimized by strategic supplementary feeding.
Selection of sheep for response to Trichostrongylus colubriformis larvae: genetic parameters
- R. R. Woolastont, R. G. Windon
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- 18 August 2016, pp. 41-48
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Data were analysed from a long-term selection experiment with Merino sheep, based on immunological responsiveness to the intestinal nematode Trichostrongylus colubriformis. For the first 14 years of selection, the criterion was the mean of five fortnightly faecal worm-egg counts (FECs) of pen-housed lambs that were vaccinated with irradiated larvae then challenged with normal T. colubriformis larvae. For most of the lambs born in the subsequent 6 years, the selection criterion was the mean of three weekly FECs of grazing lambs following a secondary challenge with T. colubriformis larvae. Data from 2233 lambs were included in the analyses.
At the end of the experiment, the lines selected for high and low response to challenge differed by 2·3 to 2·9 phenotypic standard deviations. The heritability of average pen-tested FEC was 0·38 (s.e. 0·04), similar to that for average FEC after secondary field challenge (0·37, s.e. 007). Average FECs from the primary field challenge were less heritable (0·21, s.e. 006). Counts recorded on pen-tested animals at 3, 5, 7, 9 and 11 weeks after infection were all highly correlated genetically (estimates 0·93 to 0·99) and of similar heritability (0·33 to 0·39) with a non-significant tendency for later FECs to be more heritable. Phenotypic correlations were lower, ranging from 0·60 for counts 8 weeks apart, to 0·78 to 0·81 for adjacent samples 2 weeks apart. Single-record heritability estimates at 3, 4 and 5 weeks after secondary infection in grazing lambs did not differ statistically from each other but were highest at the 5th week after infection at 0·33 (s.e. 007).
FECs determined in pens were imperfectly correlated with FECs determined at pasture (genetic correlation 0·72, s.e. 013). Phenotypic correlations of single-record FECs across primary and secondary field challenges were low (around 0·2), although the genetic correlation between mean primary FEC and mean secondary FEC was not significantly different from unity. Testing under standardized conditions in pens did not result in consistently higher heritabilities than testing immunologically primed lambs at pasture. Repeated measurement in a breeding programme offers little additional benefit, except when lambs have had ample prior experience of parasite infection, with the two measures separated by an anthelmintic treatment. If an objective of a Merino breeding programme is to reduce FEC under field conditions, then using one measure in the field, approximately 3 to 5 weeks after a secondary artificial infection, is likely to lead to long-term progress.
Genetic parameters of milk traits in Latxa dairy sheep
- A. Legarra, E. Ugarte
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- 18 August 2016, pp. 407-412
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A total of 7444 lactation records which include milk, fat and protein yields (MY, FY, PY) and fat and protein content (F%, P%) from 6429 Black-Faced Latxa ewes were employed to estimate genetic parameters for milk traits. Traits were standardized to 120 days of lactation. For the calculation of composition traits, not all test-days had their composition measured and therefore a correction taking this into account was included in the analysis. A first-derivative restricted maximum likelihood algorithm was used on an animal model with repeatability analysis, using models including fixed effects (flock-year-season of lambing, age-parity at lambing, number of lambs, interval between lambing and first milk recording and the combination of sampled test-days) and random effects (the additive genetic effect and the permanent environmental effect). The resulting heritabilities were 0·20, 0·16, 0·18, 0·14 and 0·38 for MY, FY, PY, F% and P% respectively. Heritability of F% was much lower than expected, probably due to problems derived from the recording method. Genetic correlations were high and positive between yields and moderately positive between F% and P%, and negative or null between yields and composition, as has been reported for other European dairy sheep breeds. As most of the milk produced by Latxa dairy sheep is processed into cheese, the inclusion of milk sampling in official milk recording and a change in the selection criterion are recommended to avoid a long-term worsening in milk composition.
Growth, development and meat science
Effect of double-muscling in Belgian Blue young bulls on the intramuscular fatty acid composition with emphasis on conjugated linoleic acid and polyunsaturated fatty acids
- K. Raes, S. de Smet, D. Demeyer
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- 18 August 2016, pp. 253-260
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The effect of double-muscling (DM) genotype (double-muscling, mh/mh; heterozygous, mh/+; normal, +/+) of Belgian Blue (BB) young bulls on the intramuscular fatty acid composition, in particular conjugated linoleic acid (CLA) and polyunsaturated fatty acids (PUFA) was examined in five different muscles. The relative fatty acid composition showed only minor differences between muscles within genotypes. However, the DM genotype had a large effect on both the intramuscular total fatty acid content and on the relative fatty acid composition. Across muscles, the mh/mh animals had a lower total fatty acid content compared with the +/+animals (907 v: 2656 mg/100 g muscle; P < 0·01) and a higher PUFA proportion in total fatty acids (27·5 v 11·3 g/100 g total fatty acids; P < 0001), resulting in a higher PUFA/saturated fatty acid ratio (0·55 v 0·18; P < 0·01) and a lower n-6/n-3 ratio (5·34 v. 6·17; P < 0·01). The heterozygous genotype was intermediate between the two homozygous genotypes. The relative CLA content was similar in the mh/mh and +/+ genotypes and approximated 0·4 to 0·5 g/100 g total fatty acids. From the data it is further suggested that differences in the metabolism of the n-3 and n-6 fatty acids could exist between DM genotypes.
Breeding and genetics
Using artificial intelligence to design and implement a morphological assessment system in beef cattle
- F. Goyache, J. J. del Coz, J. R. Quevedo, S. López, J. Alonso, J. Ranilla, O. Luaces, I. Alvarez, A. Bahamonde
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- 18 August 2016, pp. 49-60
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In this paper a methodology is developed to improve the design and implementation of a linear morphological system in beef cattle using artificial intelligence. The proposed process involves an iterative mechanism where type traits are successively defined and computationally represented using knowledge engineering methodologies, scored by a set of trained human experts and finally, analysed by means of four reputed machine learning algorithms. The results thus achieved serve as feed back to the next iteration in order to improve the accuracy and efficacy of the proposed assessment system. A sample of 260 conformation records of the Asturiana de los Valles beef cattle breed is shown to illustrate the methodology. Three sources of inconsistency were detected: (a) the existence of different interpretations of the trait’s definition, increasing the subjectivity of the assessment; (b) the narrow range of variation of some of the anatomical traits assessed; (c) the inclusion of some complex traits in the assessment system. In this sense, the reopening of the evaluated Asturiana de los Valles assessment system is recommended. In spite of the difficulty of collecting data from live animals, further implications of the artificial intelligence systems on morphological assessment are pointed out.
Multi-trait selection indexes for sustainable UK hill sheep production
- J. Conington, S.C. Bishop, B. Grundy, A. Waterhouse, G. Simm
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- 18 August 2016, pp. 413-423
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Three selection indexes for the UK hill sheep sector are derived to suit the extremes of hill production systems. These are: (i) intensive, where all surplus lambs not required for breeding are finished for slaughter, (ii) extensive, where all surplus ‘store’ lambs are sold to other farmers for finishing, and (iii) semi-intensive, which is intermediate between the two extremes, i.e. farms finish some lambs for slaughter and sell others as store lambs. Parameters for 12 breeding goal and index traits were estimated using a total of 3962 lamb records and 5944 ewe lambing records from Scottish Blackface sheep on two Scottish Agricultural College experimental hill farms. The breeding goal comprised carcass, maternal and survival traits. The evaluation of these indexes showed that improvements in maternal traits are possible, along with more modest improvements in carcass quality traits. Responses to selection are expected to be lower for the extensive farm in general, compared with the intensive farm. Evaluations of alternative indexes show that an index using measurements of fat and muscle on ewes rather than on lambs may be more cost-effective to implement in practice, compared with the original index, although this change results in a higher (i.e. undesirable) gain in mature size. Sensitivity analyses showed that in general, the indexes are robust to changes in economic values and to changes in heritability estimates.
Genetic resistance to gastro-intestinal nematode parasites in Galla and Small East African goats in the sub-humid tropics
- R. L. Baker, J. O. Audho, E. O. Aduda, W. Thorpe
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- 18 August 2016, pp. 61-70
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A study was carried out from 1992 to 1996 to compare the resistance to naturally acquired gastro-intestinal (GI) nematode parasite infections (predominantly Haemonchus contortus) of Galla and Small East African goats in the sub-humid coastal region of Kenya. A total of 204 Galla and 349 Small East African (SEA) kids were born from five kiddings. These were the progeny of 18 Galla and 17 SEA bucks. Live weights (LWT), blood packed-cell volume (PCV) and faecal egg count (FEC) were recorded at 1- to 2-month intervals from birth to about 14 months of age. The SEA kids were more resistant to GI nematode parasites than Galla kids as shown by their significantly lower FEC (P < 0·001) in the post-weaning period (8- to 14-month-old kids) and lower mortality from birth to 14 months of age (P < 0·05). There was no significant (P > 0·05) breed effect on PCV, but Galla kids were significantly heavier (P < 0·001) at all measurement times between birth and 14 months of age. Heritability estimates for LWT, PCV and FEC at the different sampling times were characterized by high standard errors. Heritability estimates for records taken at 4·5 and 8 months of age from a repeated measures analysis were 0·18 (s.e.0·08) for PCV and 0·13 (s.e.0·07) for logarithm-transformed FEC. The phenotypic and genetic correlation estimates between PCV and LFEC were moderately to highly negative and averaged –0·36 and –0·53, respectively. The results are discussed in relation to the limited evidence for resistance to GI nematode infections in goats and compared with the much stronger evidence for resistance in sheep.
Growth, development and meat science
Effect of age of castration, oestradiol treatment and genotype on the fat colour of beef cattle raised at pasture
- C. Gazzola, M. R. Jeffery, D. H. White, R. A. Hill, D. J. Reid
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- Published online by Cambridge University Press:
- 18 August 2016, pp. 261-266
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It is hypothesized that the fat colour of steers raised at pasture can be manipulated by altering animal growth patterns using the effects of post-pubertal surgical castration and oestradiol treatment. The fat colour of 151 steers of three genotypes of beef cattle, castrated at approximately 9 months or 18 months of age and treated, or not treated, with oestradiol after castration, was studied.
Surgical castration of beef cattle at both 9 months of age or 18 months of age caused no readily apparent animal welfare problems. The combined effects of early or late castration and oestradiol treatment produced varying growth patterns with early castrates exposed to two post-castration episodes of growth associated with carotene-rich forage and late castrates only one such episode of growth.
Late castrates and early castrates treated with oestradiol had a less yellow fat than early castrates not treated with oestradiol. The proportion of carcasses with commercially significant yellowness in the fat was decreased by either late castration or by oestradiol treatment. There was no effect of genotype on fat colour.
Pulsatile growth hormone secretion, circulating insulin-like growth factor-1 concentration and cellular density of somatotrophs differ between Wagyu and Holstein steers
- M. Matsuzaki, T. Sato, S. Morita, N. Shiba, E. Tsuneishi, S. Hara, K. Ozutsumi, T. Yamaguchi
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- Published online by Cambridge University Press:
- 18 August 2016, pp. 425-432
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Japanese Black cattle (Wagyu), deposit much higher amounts of intramuscular fat, known as marbling, than other breeds of cattle. To determine whether this unique fat deposition is attributable to the somatotropic axis, we compared pulsatile growth hormone (GH) secretion, plasma levels of insulin-like growth factor-1 (IGF-1) and cellular density of somatotrophs (GH-expressing cells) in the anterior pituitary glands of Japanese Black and Holstein steers. Blood samples were withdrawn every 15 min for 6 h from 14 Japanese Black and 12 Holstein steers at about 17 months of age, and GH and IGF-1 concentrations were determined. The distribution and proportion of GH-expressing cells were analysed by immunohistochemistry combined with point-count morphometry in pituitaries from six steers from each breed aged about 18 to 21 months. Overall mean and baseline plasma GH concentrations were lower (P < 0·001) in Japanese Black than Holstein steers. In addition, Japanese Black had smaller (P < 0·05) amplitudes of GH secretory pulses than Holstein steers, whereas the GH pulse frequency did not differ between the breeds. Japanese Black steers also had lower (P < 0·001) plasma levels of IGF-1 than Holstein steers. The marbling score of Japanese Black steers was higher (P < 0·001) than that of Holsteins at the same carcass weight. The proportion of GH-expressing cells was smaller (P < 0·05) in Japanese Black than Holstein steers at the hind dorsal and hind ventral regions of the adenohypophysis. Thus, in Japanese Black and Holstein steers, the breed difference in the relative density of GH-expressing cells corresponded to that in profiles of pulsatile GH secretion. These results suggest that the features of the somatotropic axis intrinsically differ between Japanese Black and Holstein cattle and that these features may be partly responsible for the genetic ability of the former to deposit greater amounts of marbling fat and for the smaller frame of Wagyu cattle.
The porcine glucocorticoid receptor: sequencing a 2.1 kb cDNA fragment and raising specific polyclonal antibodies for western blotting, immunoprecipitation and immunohistochemistry
- M. Gutscher, S. Eder, M. Müller, R. Claus
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- Published online by Cambridge University Press:
- 18 August 2016, pp. 267-278
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Glucocorticoids and their tissue receptors are involved in many metabolic and developmental processes. Until now only two short fragments with a total length of 200 amino acids were known from the glucocorticoid receptor of the pig. Therefore we sequenced the main part (2.1 kb) of the porcine receptor. In addition, we subcloned a cDNA fragment of this sequence coding for 135 aa of the modulatory region in a pET expression vector. The protein fragment was expressed in E. coli as a his-tag fusion protein. In the SDS-PAGE, the crude E. coli extracts showed an enrichment of a 15 kDa protein which corresponds to the estimated molecular weight for the receptor fragment.
After lysis and Ni-NTA affinity chromatography under denaturing conditions the protein was further purified either by dialysis (native protein) or by SDS-PAGE (linearized form). Both forms were emulsified together in adjuvant and used for rabbit immunization.
The resulting antibodies were characterized by western blot analysis, immunoprecipitation, and additionally by immunohistochemistry. Western blot analysis confirmed the binding of the denatured protein by the antiserum and revealed a high binding affinity. Immunoprecipitation demonstrated that both the occupied and unoccupied forms of the receptor are detected. The specificity of the antiserum for pGCR was additionally demonstrated by immunohistochemistry.