Editorial
A first collaborative attempt at a global revision of Trypetheliaceae (Ascomycota: Dothideomycetes: Trypetheliales)
- André APTROOT, Robert LÜCKING
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 607-608
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Forty-six new species of Trypetheliaceae from the tropics
- André APTROOT, Damien ERTZ, Javier Angel ETAYO SALAZAR, Cécile GUEIDAN, Joel Alejandro MERCADO DIAZ, Felix SCHUMM, Gothamie WEERAKOON
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 609-638
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The following 46 new species of Trypetheliaceae are described: Astrothelium aenascens Aptroot from Papua New Guinea, which is similar to A. aenoides but differs by the hamathecium which is not inspersed; A. alboverrucoides Aptroot from Indonesia with globose ascomata with constricted base, internally similar to A. megaspermum; A. clypeatum Aptroot & Gueidan from Vietnam with black conical ascomata in which the pseudostroma is reminiscent of a clypeus, a rimose thallus, and 3-septate ascospores, 85–95×22–25 µm; A. colombiense Aptroot from Colombia with 1 muriform ascospore of 240–300×45–50 µm per ascus, and an inspersed hamathecium; A. condoricum Aptroot from Ecuador with a bright orange thallus and contrasting bright scarlet internal pigment, and muriform ascospores, 38–42×18–21 µm; A. corallinum Aptroot from Guyana, which is most similar to A. ochroleucoides but the thallus is without lichexanthone; A. dicoloratum Aptroot from Venezuela with an orange thallus and more yellowish pseudostromata with usually only 1 ascoma, and 9–11-septate ascospores; A. ecuadoriense Aptroot from Ecuador with ascospores 2 per ascus, muriform, 80–175×25–50 µm, and an inspersed hamathecium; A. flavomaculatum Aptroot from Ecuador, Guyana and Venezuela which is similar to A. graphicum, but with ascospores 50–75×12–25 µm; A. flavomeristosporum Aptroot from the Philippines and Ecuador with mostly simple ascomata with an orange to yellow, inspersed hamathecium and muriform ascospores 140–200×25–30 µm; A. flavostiolatum Aptroot from Ecuador with bright yellow ostioles and a very irregular thallus, and muriform ascospores, 175–230×35–45 µm; A. guianense Aptroot from Guyana with a very irregular thallus, eccentric, fused ostioles and ascospores 4 per ascus, muriform, 70–80×20–25 µm; A. inspersogalbineum Aptroot & Weerakoon from Singapore which is similar to A. macrocarpum but with the hamathecium inspersed; A. komposchii Aptroot from Venezuela with chimney-like ostioles and a very irregular, almost squamulose thallus and muriform ascospores, 130–180×35–45 µm; A. laurerosphaerioides Aptroot from Guyana with aggregated ascomata with internally and partly (when abraded) also superficially orange anthraquinone pigment, ascospores 2 per ascus, muriform, 110–130×30–35 µm; A. lucidomedullatum Aptroot from Ecuador with lichexanthone in the medulla of the thallus, ascospores 4 per ascus, muriform, 80–115×25–35 µm; A. lucidostromum Aptroot from Guyana which is similar to A. eustomuralis but lichexanthone is present in the whole pseudostroma; A. lucidothallinum Aptroot from Guyana with the thallus containing lichexanthone, ascomata in pseudostromata without lichexanthone, ostioles apical, hamathecium not inspersed, ascospores muriform, 70–90×18–20 µm; A. mediocrassum Aptroot from Guyana which resembles A. octosporum but without lichexanthone in the thallus or pseudostromata, muriform ascospores, 70–80×22–25 µm, with median septum strongly thickened; A. megatropicum Aptroot from Guyana with 3-septate ascospores 100–120×33–35 µm, and hemispherical dark brown pseudostromata; A. megochroleucum Aptroot from El Salvador with 3-septate ascospores 60–70×16–18 µm and lichexanthone in the thallus and pseudostromata; A. neoinspersum Aptroot from El Salvador which is similar to A. aenascens but with bright yellow pseudostromata; A. perspersum Aptroot & Ertz from Gabon which is similar to A. scoria but with ascospores 26–38×7–9 µm; A. philippinense Aptroot & Schumm from the Philippines without pseudostromata, ostiole apical, hamathecium inspersed, ascospores muriform, 125–170×30–35 µm, 4 per ascus; A. pseudannulare Aptroot & Etayo from Ecuador with the appearance of the A. puiggarii-group, but differing from all other species of it by the 3-septate ascospores 80–88×32–36 µm, which are 2–4 per ascus; A. pseudodissimulum Aptroot from Papua New Guinea with K+ red crystals in the ascoma wall and 5-septate ascospores of 25–33×9–11 µm; A. pseudoferrugineum Aptroot from Indonesia, of the A. conicum-group with an orange thallus and pseudostroma pruina, differing from A. ferrugineum by the ascospores 28–31×9–11 µm and the more glossy thallus; A. pseudomegalophthalmum Aptroot from Colombia, similar to A. megaspermum but differing by the 7-septate ascospores 152–166×32–37 µm; A. rimosum Aptroot from Guyana and Colombia with 7–11-septate ascospores 110–150×30–37 µm and a rimose thallus with yellow medulla; A. sanguineoxanthum Aptroot from Brazil with the thallus containing lichexanthone and pseudostromata with numerous immersed round ascomata, the whole inside of which is full of red, K+ green pigment; A. septemseptatum Aptroot from Guyana and Venezuela with the thallus and pseudostromata UV+ yellow and 7–9-septate ascospores 50–55×12–17 µm; A. sexloculatum Aptroot from Guyana and Papua New Guinea with 5-septate ascospores 25–27×7–11 µm and lichexanthone in the thallus and pseudostromata; A. sipmanii Aptroot from Guyana with simple ascomata with 5-septate ascospores 100–150×35–40 µm and an inspersed hamathecium; A. trypethelioides Aptroot from Venezuela with fused ostioles, an inspersed hamathecium and 7–9-septate ascospores 49–52×13–16 µm; A. ultralucens Aptroot from Venezuela with lichexanthone in the thallus and pseudostromata, fused ostioles and 3-septate ascospores over 105–130×35–42 µm; A. vulcanum from Guyana, of the A. nitidiusculum-group with simple ascomata, an inspersed hamathecium and lichexanthone; A. zebrinum Aptroot from Guyana with fused ostioles and 7-septate ascospores 60–70 µm long, without lichexanthone, anthraquinones and inspersion; Polymeridium rhodopruinosum Aptroot from Puerto Rico with red pruina on the ascomata and 3-septate ascospores 17–19×3·5–5·0 µm; Pseudopyrenula americana Aptroot from Guyana with 3-septate ascospores 26–32×7–10 µm, without inspersion and without lichexanthone; P. guianensis Aptroot from French Guiana and Surinam with a hyaline hamathecium with inspersion, a thallus with lichexanthone and 3-septate ascospores 21–25×6–9 µm; P. hexamera Aptroot from Venezuela with 5-septate ascospores 16–21×6–7 µm, lumina clearly diamond-shaped; P. thallina Lücking & Aptroot from Costa Rica with a greenish corticate thallus and 3-septate ascospores, 21–25×6–9 µm; Trypethelium infraeluteriae Aptroot & Gueidan from Vietnam which is similar to T. subeluteriae but with lower pseudostromata and ascospores 7–9-septate, 37–42×9–11 µm; Viridothelium inspersum Aptroot from Papua New Guinea with solitary, immersed ascomata, an inspersed hamathecium, and 12–14-septate ascospores, 60–75×12–17 µm; V. kinabaluense Aptroot from Sabah which is similar to V. indutum with emergent black ascomata, but with 17–25-septate ascospores 100–150×18–23 µm; and V. solomonense Aptroot from the Solomon Islands having ascomata with lateral, partly fused ostioles and black clypeus, and ascospores 15–19-septate, 75–98×17–20 µm. The new species are known from Brazil, Colombia, Costa Rica, Ecuador, El Salvador, Gabon, Guyana, Indonesia, Papua New Guinea, the Philippines, Puerto Rico, Sabah, Singapore, Solomon Islands, Surinam, Venezuela and/or Vietnam.
A pot-pourri of new species of Trypetheliaceae resulting from molecular phylogenetic studies
- Robert LÜCKING, Matthew P. NELSEN, André APTROOT, Michel N. BENATTI, Nguyen Quoc BINH, Cécile GUEIDAN, Martha Cecilia GUTIÉRREZ, Patricia JUNGBLUTH, H. Thorsten LUMBSCH, Marcelo P. MARCELLI, Bibiana MONCADA, Khwanruan NAKSUWANKUL, Thelma OROZCO, Noris SALAZAR-ALLEN, Dalip K. UPRETI
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 639-660
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Based on separately obtained and analyzed molecular data and within the framework of a global revision of the family Trypetheliaceae, 21 new species are described, from the Neotropics and tropical Asia, in the genera Architrypethelium (1), Astrothelium (15), Bathelium (1), Nigrovothelium (1), Trypethelium (1), and Viridothelium (2), namely: Architrypethelium lauropaluanum Lücking, M. P. Nelsen & Marcelli sp. nov., differing from A. hyalinum in the perithecia immersed between coarse thallus verrucae and in the additional ascospore septa; Astrothelium aurantiacocinereum Lücking, Naksuwankul & Lumbsch sp. nov., differing from A. aeneum in the prominent, well-delimited, trypethelioid pseudostromata and the absence of pigment on the thallus surface, as well as in the barely lichenized thallus; A. carassense Lücking, M. P. Nelsen & Marcelli sp. nov., differing from A. purpurascens in orange, K+ red pseudostroma pigment and the slightly larger ascospores; A. cryptolucens Lücking, M. P. Nelsen & N. Salazar sp. nov., differing from A. carrascoense in the inspersed hymenium; A. fijiense Lücking, Naksuwankul & Lumbsch sp. nov., differing from A. cinereorosellum in the presence of lichexanthone on the well-delimited pseudostromata and in the slightly shorter ascospores; A. laevithallinum Lücking, M. P. Nelsen & Marcelli sp. nov., differing from A. endochryseum in the smooth thallus; A. leucosessile Lücking, M. P. Nelsen & Aptroot sp. nov., differing from A. phlyctaena in the conspicuous, sessile pseudostromata; A. macrostomoides Lücking, M. P. Nelsen & Benatti sp. nov., differing from A. macrostomum in the larger ascospores; A. megacrypticum Lücking, M. P. Nelsen & N. Salazar sp. nov., differing from A. longisporum in the single-spored asci and larger ascospores; A. nicaraguense Lücking, M. P. Nelsen & T. Orozco sp. nov., differing from A. gigantosporum in the smaller ascospores; A. norisianum Lücking, M. P. Nelsen & Aptroot sp. nov., differing from A. sepultum in the distinct, well-delimited pseudostromata; A. obtectum Lücking, M. P. Nelsen & Benatti sp. nov., differing from A. nigrocacuminum in the smaller ascospores; A. sordithecium Lücking, M. P. Nelsen & Marcelli sp. nov., differing from A. leucothelium in the inspersed hymenium and the absence of lichexanthone from the thallus surface outside the pseudostromata; A. subendochryseum Lücking, M. P. Nelsen & Marcelli sp. nov., differing from A. endochryseum in the absence of pigment in the pseudostromata and the lateral thallus cover of the pseudostromata; A. subinterjectum Lücking, M. P. Nelsen & Jungbluth sp. nov., differing from A. obtectum in the smaller pseudostromata and smaller ascospores, and from A. interjectum in the diffuse pseudostromata and smaller ascospores; Bathelium porinosporum Lücking, M. P. Nelsen & Gueidan sp. nov., differing from other Bathelium species in the 3-septate, euseptate ascospores; Nigrovothelium bullatum Lücking, Upreti & Lumbsch sp. nov., differing from N. tropicum in the bullate thallus; Trypethelium tolimense Lücking, Moncada & M. Gut. sp. nov., differing from T. xanthoplatystomum in the absence of a yellow-orange pigment on the pseudostromata and the K+ yellow (not K+ red) medullary pigment; Viridothelium tricolor Lücking, M. P. Nelsen & N. Salazar sp. nov., characterized by black perithecia with a lateral ostiole immersed in white pseudostromata strongly contrasting with the surrounding brown thallus, in combination with 2-spored asci and large, muriform ascospores; and V. vonkonratii Lücking, Naksuwankul & Lumbsch sp. nov., differing from V. virens in larger ascospores and mostly solitary ascomata. All species are illustrated and their taxonomy and phylogenetic relationships are discussed. ITS barcoding sequences are reported for five specimens of Bathelium porinosporum.
Trypetheliaceae of Bolivia: an updated checklist with descriptions of twenty-four new species
- Adam FLAKUS, Martin KUKWA, André APTROOT
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 661-692
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The present treatment shows that the lichen family Trypetheliaceae is an important component of lowland and montane tropical forests in Bolivia. A total of 75 species are currently recognized in Bolivia, of which 24 are new to science and a further 37 are reported for the first time from the country. The following species are described: Architrypethelium penuriixanthum Flakus & Aptroot sp. nov. that differs from A. hyalinum in the lack of lichexanthone in the thallus; Astrothelium amylosporum Flakus & Aptroot sp. nov. that differs from A. subdisjunctum in having 8-spored asci and amyloid ascospores; A. bullatum Flakus & Aptroot sp. nov. that differs from A. megaspermum in having a bullate thallus, a clear hamathecium, 8-spored asci and smaller amyloid ascospores; A. carrascoense Flakus, Kukwa & Aptroot sp. nov. that differs from A. meristosporum in having broader ascospores without distinctly thickened median septa, an unidentified xanthone as major substance, and mostly eccentric ostioles; A. elixii Flakus & Aptroot sp. nov. that differs from all other Astrothelium species in the presence of lichexanthone in the outer layer of thallus and pseudostromata and isohypocrellin inside the pseudostromata, and muriform ascospores; A. inspersotuberculosum Flakus & Aptroot sp. nov. that differs from A. tuberculosum in having an inspersed hamathecium; A. megaeneum Flakus & Aptroot sp. nov. that differs from A. croceum in having a thallus covered by parietin, and mostly fused ascomata with intermediate, fused to separated ostioles surrounded by a common ostiolar area; A. neodiplocarpum Flakus, Kukwa & Aptroot sp. nov. that differs from A. diplocarpum in the absence of medullary pigment and in the amyloid ascospores; A. nigrocacuminum Flakus, Kukwa & Aptroot sp. nov. that differs from A. megochroleucum in having fused, eccentric ostioles and black (UV−) tops of the pseudostromata; A. pallidoflavum Flakus & Aptroot sp. nov. that differs from A. cinnamomeum in having wider ascospores; A. pyrenuliforme Flakus & Aptroot sp. nov. that differs from A. ecuadoriensis ecuadoriense in having shorter ascospores and in the presence of pseudocyphellae; A. subscoria Flakus & Aptroot sp. nov. that differs from A. scoria in having non-aggregated ascomata; A. variabile Flakus & Aptroot sp. nov. that differs from A. ochroleucoides in the longer ascospores; Bathelium boliviense Flakus & Aptroot sp. nov. that differs from B. lineare in the presence of isohypocrellin inside the pseudostromata; B. flavostiolatum Flakus & Aptroot sp. nov. that differs from all other Bathelium species in the presence of lichexanthone near the ostioles (tops of pseudostromata UV+ yellow) and an orange (K+ carmine red) pigment inside the pseudostromata, the absence of lichexanthone in the thallus, an inspersed hamathecium, and 13–17-septate ascospores; B. inspersomastoideum Flakus & Aptroot sp. nov. that differs from B. mastoideum in having an inspersed hamathecium; B. mirabile Flakus, Kukwa & Aptroot sp. nov. that differs from other Bathelium species in the pseudostromata containing isohypocrellin inside and parietin outside; B. pruinosum Flakus, Kukwa & Aptroot sp. nov. that differs from Astrothelium ochroleucoides in having 8-spored asci, shorter ascospores, an inspersed hamathecium, and an unidentified anthraquinone (orange pigment K+ carmine red) inside the pseudostromata; Constrictolumina chiquitana Flakus, Kukwa & Aptroot sp. nov. that differs from other known Constrictolumina species in having brown and 1-septate to submuriform ascospores; Dictyomeridium lueckingii Flakus & Aptroot sp. nov. that differs from D. proponens in having smaller and less septate ascospores; Polymeridium xanthoexcentricum Flakus & Aptroot sp. nov. that differs from P. alboflavescens in having mostly eccentric ostioles; Pseudopyrenula flavosuperans Flakus & Aptroot sp. nov. that differs from P. superans in having a hamathecium inspersed with yellow oil globules; Trypethelium astroideum Flakus & Aptroot sp. nov. that differs from T. subeluteriae in having K+ carmine red pseudostromata containing parietin inside and black tops with an additional unidentified anthraquinone (rust-red pigment K+ purple, UV−) on the outside, partly fused ostioles, and larger ascospores; and T. xanthoplatystomum Flakus & Aptroot sp. nov. that differs from T. platystomum in the presence of lichexanthone in the thallus.
New Trypetheliaceae from the Amazon basin in Rondônia (Brazil), the centre of diversity of the genus Astrothelium
- André APTROOT, Marcela Eugenia da Silva CÁCERES
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 693-712
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The following 24 new species of Trypetheliaceae are described after three weeks of fieldwork in an area with a radius of 50 km around Porto Velho in Rondônia: Astrothelium bivelum with astrothelioid ascomata, 5-septate ascospores with polar gelatinous caps, and a thallus without lichexanthone; A. curvisporum with bent, 5-septate ascospores of 115–135×29–36 μm with a 17–22 μm thick gelatinous layer; A. decemseptatum with pseudostroma that are essentially black and look like breaking through the bark, with anthraquinones mostly on the pseudostromata but also on some parts of the thallus, best seen under UV light as the colour of the pruina is not very strong, and ascospores (7–)9–11-septate, fusiform, 50–65×11–17 μm; A. disjunctum with black pseudostroma and ascospores 3-septate, (27–)29–33×(8–)12–14 μm; A. duplicatum which is similar to A. mesoduplex, but pseudostroma are only yellowish inside and ascospores 45–55×11–15 μm; A. eumultiseptatum which is similar to A. eustomum, but with 9–11-septate ascospores of 65–70×15–17 μm; A. eustomurale which is also similar to A. eustomum, but with submuriform ascospores of 37–45×15–19 μm; A. flavoduplex which is similar to A. mesoduplex, but with ascospores 110–350×20–27 μm and the thallus containing lichexanthone; A. flavomurisporum with deeply immersed ascomata with muriform ascospores of 165–200×28–35 μm, with a distinctly thickened central septum and yellow oil; A. flavostromatum which is close to A. aeneoides and mainly differs by the bullate thallus and the cream pseudostromata; A. flavum which is similar to A. aeneum, but differs in the contrast between the linear to reticulate yellow stromata and the unpigmented thallus, and the ascospores of 16–18×6–7 μm; A. mesoduplex which is similar to A. flavoduplex, but with ascospores 90–100×20–23 μm and a thallus without lichexanthone; A. nigrum with mostly conical black pseudostromata that contrast sharply with the thallus, superficially resembling Pyrenula infraleucotrypa; A. novemseptatum which is similar to A. eumultiseptatum, but without lichexanthone anywhere in the thallus or pseudostroma; A. ochroleucoides which is similar to A. corallinum, but with lichexanthone on the thallus and pseudostromata; A. octoseptatum which is similar to A. eumultiseptatum, but with the whole pseudostroma, not just the ostioles, containing lichexanthone, and ascospores somewhat asymmetrical, which is highlighted by the unusual dominant even number of septa (eight) and the asymmetrically placed central septum in the case of uneven septum numbers; A. quatuorseptatum which is similar to A. octoseptatum Aptroot & M. Cáceres, but without lichexanthone, ascospores somewhat asymmetrical, which is highlighted by the unusual dominant even number of septa (four) and the asymmetrically placed central septum in the case of uneven septum numbers; A. robustosporum with solitary ascomata with an eccentric ostiole, and ascospores 11–15-septate, 90–125×20–27 μm; A. solitarium which is similar to A. ceratinum (Fée) Aptroot & Lücking, but with ascospores 33–36×10–11 μm; A. stromatofluorescens which is close to A. phlyctaena, but with lichexanthone only on the pseudostroma, not on the thallus; A. supraclandestinum is close to A. subclandestinum, but the hamathecium is not inspersed; A. testudineum with solitary ascomata with an eccentric ostiole, an inspersed hamathecium, and ascospores 8 per ascus, muriform, 50–65×23–27 μm; A. xanthosuperbum which is similar to A. disjunctum, but with muriform ascospores, 130–160×28–35 μm; and Pseudopyrenula flavoreagens which is similar to P. subgregaria, but with lichexanthone in the thallus. Only a few species were also found elsewhere, such as other areas of Brazil, or in Venezuela, Colombia, Guyana, Panama, Australia and/or Papua New Guinea. Currently, 55 species of Trypetheliaceae are known from this spot, including 46 species of Astrothelium. The Amazon basin is the centre of diversity for the family, at least for Astrothelium, the largest genus in the family.
New Trypetheliaceae from northern and southern Atlantic rainforests in Brazil
- André APTROOT, Cléverton de Oliveira MENDONÇA, Danyelly Santos ANDRADE, Jeanne dos Reis SILVA, Suzana Maria de Azevedo MARTINS, Emerson GUMBOSKI, Carlos Augusto Vidigal FRAGA, Júnior, Marcela Eugenia da Silva CÁCERES
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 713-725
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The following 16 new species of Trypetheliaceae are described from Brazil: Astrothelium aeneoides Aptroot, differing from A. aeneum by the absence of pigment on the thallus, but medulla of pseudostroma K+ blood red and ascospores 3-septate, lumina diamond-shaped; A. curvatum Aptroot & M. Cáceres with immersed pyriform ascomata with lateral ostioles and bent, muriform ascospores, 74–90×25–34 μm; A. globosum Aptroot & M. Cáceres with immersed ascomata, thallus consisting of nearly globose warts and ascospores 3-septate, 35–40×11–13 μm; A. graphicum Aptroot & S. M. A. Martins with an extended, reticulate pseudostroma, which is lower than the slightly bullate thallus, orange pruina on the thallus and pseudostroma and ascospores muriform, 60–66×12–16 µm; A. longisporum Aptroot, J. R. Silva & M. Cáceres, which differs from A. megaspermum by the eccentric ostioles and the 8 instead of 4 ascospores per ascus; A. macrostomum Aptroot which is similar to A. eustomum (Mont.) Müll. Arg., but differing by the 5–7-septate ascospores 65–85×16–19 μm.; A. megeustomum Aptroot & Fraga Júnior which is similar to Astrothelium eustomum, but with muriform ascospores 117–125×17–21 μm; A. pictum Aptroot with 5-septate ascospores, red crystals in the pseudostroma medulla and lichexanthone in the thallus; A. rubrocrystallinum Aptroot & M. Cáceres which is similar to A. annulare, but with copious red crystals in a thick layer around the ascomata and ascospores 22–27×7–9 μm; A. simplex Aptroot & S. M. A. Martins with 3-septate ascospores and a very rough thallus, differing from A. sinuosum by the lack of lichexanthone; A. sinuosum Aptroot & Gumboski with an ostiolar UV+ yellow reaction, bullate thallus and a wavy gelatinous sheath around the ascospores; A. tetrasporum Aptroot & M. Cáceres which is similar to A. puiggarii, but differs by the non-inspersed hamathecium and the ascus that contains only 4 ascospores; Polymeridium endoflavens Aptroot, D. S. Andrade & M. Cáceres with yellow oil inspersion in the hamathecium and 5–7-septate ascospores 32–37×10–13 μm; P. longiflavens Aptroot, Mendonça & M. Cáceres with yellow oil inspersion in the hamathecium, an apical ostiole and 9–11-septate ascospores 57–70×12–14 μm; Trypethelium luteolucidum Aptroot, Mendonça & M. Cáceres which is similar to T. regnellii, but differs by the presence of anthraquinone crystals in the pseudostromata; and Viridothelium leptoseptatum Aptroot & M. Cáceres, resembling Astrothelium aeneum but with no pigment on the thallus, a thin to absent thallus cover on the ascomata and thin-walled, constricted ascospores with lumina of a similar shape to the ascospore cell walls. Most are known only from Brazil, but a few are also known from Mexico, Puerto Rico, and/or Guyana. North-eastern Brazil is the centre of diversity of the genus Polymeridium, with 33 species now known.
Five new species and one new record of Astrothelium (Trypetheliaceae, Ascomycota) from Thailand
- Theerapat LUANGSUPHABOOL, H. Thorsten LUMBSCH, André APTROOT, Jittra PIAPUKIEW, Ek SANGVICHIEN
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 727-737
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Five new species and one new record of Astrothelium (Trypetheliaceae) are reported from Thailand. Phylogenetic analysis of four DNA loci (ITS, nuLSU, mtSSU rDNA and RPB1) demonstrated the placement of the new species within Astrothelium, as well as their distinction from similar or related taxa. The new species are: A. flavocoronatum, with a yellow pigment surrounding the ostiole, and 3-septate ascospores 22–28×8·0–9·5 µm; A. macrostiolatum, with large whitish ostiolar area, a hamathecium inspersed with small oil droplets, and 9–11-septate ascospores 80–100×17–19 µm; A. neglectum, with lichexanthone on the thallus and pseudostromata, a non-inspersed hamathecium and 3–5-septate ascospores 21–25×7·5–9·5 µm; A. neovariolosum, with inspersed hamathecium and 3-septate ascospores 17–23×6–7 µm; and A. siamense, with inspersed hamathecium and 4–7-septate ascospores 30–50×10·5–12·0 µm. Astrothelium aenascens is reported from Thailand for the first time.
A phylogenetic framework for reassessing generic concepts and species delimitation in the lichenized family Trypetheliaceae (Ascomycota: Dothideomycetes)
- Robert LÜCKING, Matthew P. NELSEN, André APTROOT, Roselvira BARILLAS DE KLEE, Paulina A. BAWINGAN, Michel N. BENATTI, Nguyen Quoc BINH, Frank BUNGARTZ, Marcela E. S. CÁCERES, Luciana da Silva CANÊZ, José-Luis CHAVES, Damien ERTZ, Rhina Esmeralda ESQUIVEL, Lidia Itati FERRARO, Alfredo GRIJALVA, Cécile GUEIDAN, Jesús E. HERNÁNDEZ M., Allison KNIGHT, H. Thorsten LUMBSCH, Marcelo P. MARCELLI, Joel A. MERCADO-DÍAZ, Bibiana MONCADA, Eduardo A. MORALES, Khwanruan NAKSUWANKUL, Thelma OROZCO, Sittiporn PARNMEN, Eimy RIVAS PLATA, Noris SALAZAR-ALLEN, Adriano A. SPIELMANN, Nohemy VENTURA
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 739-762
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We provide an expanded and updated, 2-locus phylogeny (mtSSU, nuLSU) of the lichenized fungal family Trypetheliaceae, with a total of 196 ingroup OTUs, in order to further refine generic delimitations and species concepts in this family. As a result, the following 15 clades are recognized as separate genera, including five newly established genera: Aptrootia, Architrypethelium, Astrothelium (including the bulk of corticate species with astrothelioid ascospores; synonyms: Campylothelium, Cryptothelium, Laurera), Bathelium s. str. (excluding B. degenerans and relatives which fall into Astrothelium), the reinstated Bogoriella (for tropical, lichenized species previously placed in Mycomicrothelia), Constrictolumina gen. nov. (for tropical, lichenized species of Arthopyrenia), Dictyomeridium gen. nov. (for a subgroup of species with muriform ascospores previously placed in Polymeridium), Julella (provisionally, as the type species remains unsequenced), Marcelaria (Laurera purpurina complex), Nigrovothelium gen. nov. (for the Trypethelium tropicum group), Novomicrothelia gen. nov. (for an additional species previously placed in Mycomicrothelia), Polymeridium s. str., Pseudopyrenula, Trypethelium s. str. (T. eluteriae group), and Viridothelium gen. nov. (for the Trypethelium virens group). All recognized genera are phenotypically characterized and a discussion on the evolution of phenotypic features in the family is given. Based on the obtained phylogeny, species delimitations are revised and the importance of characters such as thallus morphology, hymenial inspersion, and secondary chemistry for taxonomic purposes is discussed, resulting in a refined species concept.
A revisionary synopsis of the Trypetheliaceae (Ascomycota: Trypetheliales)‡
- André APTROOT, Robert LÜCKING
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- 07 December 2016, pp. 763-982
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A revisionary synopsis is presented for the family Trypetheliaceae, based on a separately published phylogenetic analysis of a large number of species, morpho-anatomical and chemical study of extensive material, and revision of numerous type specimens. A total of 418 species is formally accepted in this synopsis, distributed among 15 genera as follows: Aptrootia (3), Architrypethelium (7), Astrothelium (242), Bathelium (16), Bogoriella (29), Constrictolumina (9), Dictyomeridium (7), Distothelia (3), Marcelaria (3), Nigrovothelium (2), Novomicrothelia (1), Polymeridium (50), Pseudopyrenula (20), Trypethelium (16), and Viridothelium (10). All accepted genera, including new genera described separately in this issue, are keyed out and briefly described and discussed, and keys are provided for all accepted species within each genus. Entries with full synonymy and brief descriptions, and in part also discussions, are provided for all accepted species, except those newly described elsewhere in this issue, which are cross-referenced in the corresponding keys. The description of the newly defined genera takes into account phylogeny in combination with morpho-anatomical features with the result that they are mostly recognizable by a combination of thallus, ascoma and ascospore features. Most species previously assigned to the genera Astrothelium, Campylothelium, Cryptothelium, and Trypethelium, based on a schematic concept of ascoma morphology and ascospore septation, are now included in a single genus, Astrothelium, with highly variable ascoma morphology and ascospore septation but invariably with astrothelioid ascospores (at least when young), that is diamond-shaped lumina, and a well-developed, corticate, usually olive-green thallus that often covers the ascomata. While the genera Aptrootia (large, brown, muriform ascospores), Architrypethelium (large, mostly 3-septate ascospores), and Pseudopyrenula (ecorticate, white thalli and astrothelioid ascospores) are maintained, Trypethelium is redefined to include species with raised, pseudostromatic ascomata and multiseptate ascospores with thin septa. The sister group of Trypethelium is the genus Marcelaria, with brightly coloured pseudostromata and muriform ascospores. Bathelium is now limited to species with strongly raised, fully exposed pseudostromata and septate to muriform ascospores with thin septa. Several genera are recognized for more basal lineages with mostly ecorticate, white thalli and solitary, exposed ascomata previously assigned to Arthopyrenia, Mycomicrothelia and Polymeridium, viz. Bogoriella, Constrictolumina, Dictyomeridium, and Novomicrothelia. In addition, separate genera are accepted for the Trypethelium tropicum (Nigrovothelium) and T. virens (Viridothelium) groups. In addition, a refined species concept resulting from phylogenetic studies is employed which pays particular attention to morphological features of the thallus and ascomata. Of a total of 526 names checked, 107 remain synonyms of accepted names and a further eight are newly excluded from the family. Based on these redispositions, the following 146 new combinations are proposed, including reinstatement of numerous names previously subsumed into synonymy: Architrypethelium columbianum (Nyl.) Aptroot & Lücking comb. nov., A. grande (Kremp.) Aptroot & Lücking comb. nov., Astrothelium aeneum (Eschw.) Aptroot & Lücking comb. nov., A. alboverrucum (Makhija & Patw.) Aptroot & Lücking comb. nov., A. amazonum (R. C. Harris) Aptroot & Lücking comb. nov., A. ambiguum (Malme) Aptroot & Lücking comb. nov., A. andamanicum (Makhija & Patw.) Aptroot comb. nov., A. annulare (Spreng.) Aptroot & Lücking comb. nov., A. aurantiacum (Makhija & Patw) Aptroot & Lücking comb. nov., A. auratum (R. C. Harris) Aptroot & Lücking comb. nov., A. aureomaculatum (Vain.) Aptroot & Lücking comb. nov., A. basilicum (Kremp.) Aptroot & Lücking comb. nov., A. bicolor (Taylor) Aptroot & Lücking comb. nov., A. buckii (R. C. Harris) Aptroot & Lücking comb. nov., A. calosporum (Müll. Arg.) Aptroot & Lücking comb. nov., A. cartilagineum (Fée) Aptroot & Lücking comb. nov., A. cecidiogenum (Aptroot & Lücking) Aptroot & Lücking comb. nov., A. ceratinum (Fée) Aptroot & Lücking comb. nov., A. chapadense (Malme) Aptroot & Lücking comb. nov., A. chrysoglyphum (Vain.) Aptroot & Lücking comb. nov., A. chrysostomum (Vain.) Aptroot & Lücking comb. nov., A. cinereorosellum (Kremp.) Aptroot & Lücking comb. nov., A. cinereum (Müll. Arg.) Aptroot & Lücking comb. et stat. nov., A. confluens (Müll. Arg.) Aptroot & Lücking comb. nov., A. consimile (Müll. Arg.) Aptroot & Lücking comb. nov., A. deforme (Fée) Aptroot & Lücking comb. nov., A. defossum (Müll. Arg.) Aptroot & Lücking comb. nov., A. degenerans (Vain.) Aptroot & Lücking comb. nov., A. dissimilum (Makhija & Patw.) Aptroot & Lücking comb. nov., A. effusum (Aptroot & Sipman) Aptroot & Lücking comb. nov., A. endochryseum (Vain.) Aptroot & Lücking comb. nov., A. exostemmatis (Müll. Arg.) Aptroot & Lücking comb. nov., A. feei (C. F. W. Meissn.) Aptroot & Lücking comb. nov., A. ferrugineum (Müll. Arg.) Aptroot & Lücking comb. nov., A. galligenum (Aptroot) Aptroot & Lücking comb. nov., A. gigantosporum (Müll. Arg.) Aptroot & Lücking comb. nov., A. indicum (Upreti & Ajay Singh) Aptroot & Lücking comb. nov., A. infossum (Nyl.) Aptroot & Lücking comb. nov., A. infuscatulum (Müll. Arg.) Aptroot & Lücking comb. nov., A. irregulare (Müll. Arg.) Aptroot & Lücking comb. nov., A. keralense (Upreti & Ajay Singh) Aptroot & Lücking comb. nov., A. kunzei (Fée) Aptroot & Lücking comb. nov., A. leioplacum (Müll. Arg.) Aptroot & Lücking comb. nov., A. lugescens (Nyl.) Aptroot & Lücking comb. nov., A. luridum (Zahlbr.) Aptroot & Lücking comb. nov., A. macrocarpum (Fée) Aptroot & Lücking comb. nov., A. macrosporum (Makhija & Patw.) Aptroot & Lücking comb. nov., A. marcidum (Fée) Aptroot & Lücking comb. nov., A. megaleium (Kremp.) Aptroot & Lücking comb. nov., A. megalophthalmum (Müll. Arg.) Aptroot & Lücking comb. nov., A. megalostomum (Vain.) Aptroot & Lücking comb. nov., A. megaspermum (Mont.) Aptroot & Lücking comb. nov., A. meiophorum (Nyl.) Aptroot & Lücking comb. nov., A. meristosporoides (P. M. McCarthy & Vongshew.) Aptroot & Lücking comb. nov., A. meristosporum (Mont. & Bosch) Aptroot & Lücking comb. nov., A. neogalbineum (R. C. Harris) Aptroot & Lücking comb. nov., A. nigratum (Müll. Arg.) Aptroot & Lücking comb. et stat. nov., A. nigrorufum (Makhija & Patw.) Aptroot & Lücking comb. nov., A. nitidiusculum (Nyl.) Aptroot & Lücking comb. nov., A. octosporum (Vain.) Aptroot & Lücking comb. nov., A. oligocarpum (Müll. Arg.) Aptroot & Lücking comb. nov., A. olivaceofuscum (Zenker) Aptroot & Lücking comb. nov., A. papillosum (P. M. McCarthy) Aptroot & Lücking comb. nov., A. papulosum (Nyl.) Aptroot & Lücking comb. nov., A. peranceps (Kremp.) Aptroot & Lücking comb. nov., A. phaeothelium (Nyl.) Aptroot & Lücking comb. nov., A. phlyctaenua (Fée) Aptroot & Lücking comb. nov., A. porosum (Ach.) Aptroot & Lücking comb. nov., A. praetervisum (Müll. Arg.) Aptroot & Lücking comb. nov., A. pseudoplatystomum (Makhija & Patw.) Aptroot & Lücking comb. nov., A. pseudovariatum (Upreti & Ajay Singh) Aptroot & Lücking comb. nov., A. puiggarii (Müll. Arg.) Aptroot & Lücking comb. nov., A. pulcherrimum (Fée) Aptroot & Lücking comb. nov., A. pupula (Ach.) Aptroot & Lücking comb. nov., A. purpurascens (Müll. Arg.) Aptroot & Lücking comb. nov., A. pustulatum (Vain.) Aptroot & Lücking comb. nov., A. rufescens (Müll. Arg.) Aptroot & Lücking comb. et stat. nov., A. sanguinarium (Malme) Aptroot & Lücking comb. nov., A. santessonii (Letr.-Gal.) Aptroot & Lücking comb. nov., A. saxicola (Malme) Aptroot & Lücking comb. nov., A. scoria (Fée) Aptroot & Lücking comb. nov., A. scorizum (Müll. Arg.) Aptroot & Lücking comb. nov., A. sierraleonense (C. W. Dodge) Aptroot & Lücking comb. nov., A. sikkimense (Makhija & Patw.) Aptroot & Lücking comb. nov., A. spectabile (Aptroot & Ferraro) Aptroot & Lücking comb. nov., A. sphaerioides (Mont.) Aptroot & Lücking comb. nov., A. stramineum (Malme) Aptroot & Lücking comb. nov., A. straminicolor (Nyl.) Aptroot & Lücking comb. nov., A. subcatervarium (Malme) Aptroot & Lücking comb. nov., A. subdiscretum (Nyl.) Aptroot & Lücking comb. nov., A. subdisjunctum (Müll. Arg.) Aptroot & Lücking comb. nov., A. subdissocians (Nyl. ex Vain.) Aptroot & Lücking comb. et stat. nov., A. superbum (Fr.) Aptroot & Lücking comb. nov., A. tenue (Aptroot) Aptroot & Lücking comb. nov., A. thelotremoides (Nyl.) Aptroot & Lücking comb. nov., A. trypethelizans (Nyl.) Aptroot & Lücking comb. nov., A. tuberculosum (Vain.) Aptroot & Lücking comb. nov., A. ubianense (Vain.) Aptroot & Lücking comb. nov., A. variatum (Nyl.) Aptroot & Lücking comb. nov., A. vezdae (Makhija & Patw.) Aptroot & Lücking comb. nov., Bathelium austroafricanum (Zahlbr.) Aptroot & Lücking comb. nov., B. nigroporum (Makhija & Patw.) Aptroot & Lücking comb. nov., Bogoriella alata (Groenh. ex Aptroot) Aptroot & Lücking comb. nov., B. annonacea (Müll. Arg.) Aptroot & Lücking comb. nov., B. apposita (Nyl.) Aptroot & Lücking comb. nov., B. captiosa (Kremp.) Aptroot & Lücking comb. nov., B. collospora (Vain.) Aptroot & Lücking comb. nov., B. confluens (Müll. Arg.) Aptroot & Lücking comb. nov., B. conothelena (Nyl.) Aptroot & Lücking comb. nov., B. decipiens (Müll. Arg.) Aptroot & Lücking comb. nov., B. exigua (Müll. Arg.) Aptroot & Lücking comb. nov., B. fumosula (Zahlbr.) Aptroot & Lücking comb. nov., B. hemisphaerica (Müll. Arg.) Aptroot & Lücking comb. nov., B. lateralis (Sipman) Aptroot & Lücking comb. nov., B. leuckertii (D. Hawksw. & J. C. David) Aptroot & Lücking comb. nov., B. macrocarpa (Komposch, Aptroot & Hafellner) Aptroot & Lücking comb. nov., B. megaspora (Aptroot & M. Cáceres) Aptroot & Lücking comb. nov., B. miculiformis (Nyl. ex Müll. Arg.) Aptroot & Lücking comb. nov., B. minutula (Zahlbr.) Aptroot & Lücking comb. nov., B. modesta (Müll. Arg.) Aptroot & Lücking comb. nov., B. nonensis (Stirt.) Aptroot & Lücking comb. nov., B. obovata (Stirt.) Aptroot & Lücking comb. nov., B. pachytheca (Sacc. & Syd.) Aptroot & Lücking comb. nov., B. punctata (Aptroot) Aptroot & Lücking comb. nov., B. queenslandica (Müll. Arg.) Aptroot & Lücking comb. nov., B. socialis (Zahlbr.) Aptroot & Lücking comb. nov., B. striguloides (Sérus. & Aptroot) Aptroot & Lücking comb. nov., B. subfallens (Müll. Arg.) Aptroot & Lücking comb. nov., B. thelena (Ach.) Aptroot & Lücking comb. nov., B. triangularis (Aptroot) Aptroot & Lücking comb. nov., B. xanthonica (Komposch, Aptroot & Hafellner) Aptroot & Lücking comb. nov., Constrictolumina esenbeckiana (Fée) Lücking, M. P. Nelsen & Aptroot comb. nov., C. leucostoma (Müll. Arg.) Lücking, M. P. Nelsen & Aptroot comb. nov., C. lyrata (R. C. Harris) Lücking, M. P. Nelsen & Aptroot comb. nov., C. majuscula (Nyl.) Lücking, M. P. Nelsen & Aptroot comb. nov., C. malaccitula (Nyl.) Lücking, M. P. Nelsen & Aptroot comb. nov., C. porospora (Vain.) Lücking, M. P. Nelsen & Aptroot comb. nov., Dictyomeridium amylosporum (Vain.) Aptroot, M. P. Nelsen & Lücking comb. nov., D. campylothelioides (Aptroot & Sipman) Aptroot, M. P. Nelsen & Lücking comb. nov., D. immersum (Aptroot, A. A. Menezes & M. Cáceres) Aptroot, M. P. Nelsen & Lücking comb. nov., D. isohypocrellinum (Xavier-Leite, M. Cáceres & Aptroot) Aptroot, M. P. Nelsen & Lücking comb. nov., D. paraproponens (Aptroot, M. Cáceres & E. L. Lima) Aptroot, M. P. Nelsen & Lücking comb. nov., Distothelia rubrostoma (Aptroot) Aptroot & Lücking comb. nov., Phyllobathelium chlorogastricum (Müll. Arg.) Aptroot & Lücking comb. nov., Pseudopyrenula cubana (Müll. Arg.) Aptroot & Lücking comb. nov., Viridothelium cinereoglaucescens (Vain.) Lücking, M. P. Nelsen & Aptroot comb. nov., V. indutum (Stirt.) Aptroot & Lücking comb. nov., and V. megaspermum (Makhija & Patw.) Aptroot & Lücking comb. nov. In addition, six replacement names are proposed: Astrothelium campylocartilagineum Aptroot & Lücking nom. nov., A. grossoides Aptroot & Lücking nom. nov., A. octosporoides Aptroot & Lücking nom. nov., A. scoriothelium Aptroot & Lücking nom. nov., A. pyrenastrosulphureum Aptroot & Lücking nom. nov., and Bathelium pruinolucens Aptroot & Lücking nom. et stat. nov. Along with this, 57 lectotypes are newly designated. Most species (392 out of 418) are illustrated, with a total of 697 images in 59 plates, including 406 type specimens. Where appropriate, taxa are briefly discussed. New country or continental records are listed for many species in their revised circumscription. A checklist of taxa described or placed in genera belonging in Trypetheliaceae but previously excluded from the family, and their current names, is also provided.
How diverse is the lichenized fungal family Trypetheliaceae (Ascomycota: Dothideomycetes)? A quantitative prediction of global species richness‡
- André APTROOT, Marcela E. S. CÁCERES, Mark K. JOHNSTON, Robert LÜCKING
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- Published online by Cambridge University Press:
- 07 December 2016, pp. 983-994
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A quantitative prediction of global species richness in the lichenized family Trypetheliaceae employing a grid method previously used in similar approaches for the family Graphidaceae and the genus Cora (Hygrophoraceae) is provided. 421 currently known taxa were used as a base for the calculation and we predict a total of nearly 800 species, corresponding to an increase of almost 100%. Most of the unrecognized taxa are predicted to occur in the Neotropics, which have the highest known species richness. The Palaeotropics are less diverse. In contrast to Graphidaceae, which are mostly confined to rainforests, Trypetheliaceae show substantial species richness in dry forest and savannah ecosystems, and future collection efforts should take well-preserved areas representing such ecosystems into consideration.
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Index to scientific names and nomenclatural checklist of Trypetheliaceae‡
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- 21 July 2017, pp. 995-1011
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Front Cover (OFC, IFC) and matter
LIC volume 48 issue 6 Cover and Front matter
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- 07 December 2016, pp. f1-f2
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LIC volume 48 issue 6 Cover and Back matter
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- 07 December 2016, pp. b1-b12
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