Waterhemp [Amaranthus tuberculatus (Moq.) Sauer] is one of the most troublesome agronomic weeds in the midwestern United States. The rapid evolution and selection of herbicide-resistance traits in A. tuberculatus is a major challenge in managing this species. An A. tuberculatus population, designated CHR, was identified in 2012 in Champaign County, IL, and previously characterized as resistant to herbicides from six site-of-action groups: 2,4-D (Group 4), acetolactate synthase inhibitors (Group 2), protoporphyrinogen oxidase inhibitors (Group 14), 4-hydroxyphenylpyruvate dioxygenase inhibitors (Group 27), photosystem II inhibitors (Group 5), and very-long-chain fatty-acid synthesis inhibitors (Group 15). Recently, ineffective control of CHR was observed in the field after dicamba application. Therefore, this research was initiated to confirm dicamba resistance, quantify the resistance level, and investigate its inheritance in CHR. Multiple field trials were conducted at the CHR location to confirm poor control with dicamba and compare dicamba treatments with other herbicides. Greenhouse trials were conducted to quantify the resistance level in CHR and confirm genetic inheritance of the resistance. In field trials, dicamba did not provide more than 65% control, while glyphosate and glufosinate provided at least 90% control. Multiple accessions were generated from controlled crosses and evaluated in greenhouse trials. Greenhouse dicamba dose–response experiments indicated a resistance level of 5- to 10-fold relative to a sensitive parental line. Dose–response experiments using F1 lines indicated that dicamba resistance was an incompletely dominant trait. Segregation analysis with F2 and backcross populations indicated that dicamba resistance had moderate heritability and was potentially a multigenic trait. Although dicamba resistance was predominantly inherited as a nuclear trait, minor maternal inheritance was not completely ruled out. To our knowledge, CHR is one of the first cases of dicamba resistance in A. tuberculatus. Further studies will focus on elucidating the genes involved in dicamba resistance.

Research was conducted using a functional malachite green colorimetric assay to evaluate acetyl-coenzyme A carboxylase (ACCase) activity previously identified as resistant to sethoxydim and select aryloxyphenoxypropionate (FOPs) herbicides, fenoxaprop, and fluazifop. Two resistant southern crabgrass [Digitaria ciliaris (Retz.) Koeler] biotypes, R1 and R2, containing an Ile-1781-Leu amino acid substitution and previously identified as resistant to sethoxydim, pinoxaden, and fluazifop but not clethodim was utilized as the resistant chloroplastic ACCase source compared with known susceptible (S) ACCase. Dose-response studies with sethoxydim, clethodim, fluazifop-p-butyl, and pinoxaden (0.6 to 40 µM) were conducted to compare the ACCase–herbicide interactions of R1, R2, and S using the malachite green functional assay. Assay results indicated that R biotypes required more ACCase-targeting herbicides to inhibit ACCase activity compared with S. IC50 values of all four herbicides for R biotypes were consistently an order of magnitude greater than those of S. No sequencing differences in the carboxyltransferase domain was observed for R1 and R2; however, R2 IC50 values were greater across all herbicides. These results indicate the malachite green functional assay is effective in evaluating ACCase activity of R and S biotypes in the presence of ACCase-targeting herbicides, which can be used as a replacement for the 14C-based radiometric functional assays.

Dithiopyr and dinitroanilines are preemergence-applied, mitotic-inhibiting herbicides used to control goosegrass [Eleusine indica (L.) Gaertn.] in turfgrass. A suspected resistant E. indica population was collected from a golf course putting green and was evaluated for possible resistance to dithiopyr and prodiamine. After dose–response evaluation, the α-tubulin gene was sequenced for known target-site mutations that have been reported to confer resistance to mitotic-inhibiting herbicides. A mutation was discovered that resulted in an amino acid substitution at position 136 from leucine to phenylalanine (Leu-136-Phe). Previous research has indicated that Leu-136-Phe does confer resistance to dinitroaniline herbicides. The level of resistance indicated by regression models and I50 values indicates that there is 54.1-, 4.7-, >100-, and >100-fold resistance to dithiopyr, prodiamine, pendimethalin, and oryzalin, respectively, when compared with the susceptible population based on seedling emergence response and 88.4-, 7.8-, >100-, and >100-fold resistance to dithiopyr, prodiamine, pendimethalin, and oryzalin, respectively, when compared with the susceptible population based on biomass reduction response. This is the first report of less resistance to prodiamine compared with pendimethalin or oryzalin due to a target-site α-tubulin mutation and the first report of a target-site α-tubulin mutation associated with dithiopyr resistance.

The genus Echinochloa constitutes some of the most prominent weed species found in rice (Oryza sativa L.) production worldwide. The taxonomy of Echinochloa is complex due to its morphological variations. The morphophysiological diversity and taxonomic characteristics of Echinochloa ecotypes infesting rice fields in Texas are unknown. A total of 54 Echinochloa ecotypes collected during late-season field surveys in 2015 and 2016 were characterized in a common garden in 2017. Plants were characterized for 14 morphophysiological traits, including stem angle; stem color; plant height; leaf color; leaf texture; flag leaf length, width, and angle; days to flowering; panicle length; plant biomass; seed shattering; seed yield; and seed dormancy. Principal component analysis indicated that 4 (plant height, flag leaf length, seed shattering, and seed germination) of the 14 phenological traits characterized here had significantly contributed to the overall morphological diversity of Echinochloa spp. Results showed wide interpopulation diversity for the measured traits among the E. colona ecotypes, as well as diverse intrapopulation variability in all three Echinochloa species studied, including barnyardgrass [Echinochloa crus-galli (L.) P. Beauv.], junglerice [Echinochloa colona (L.) Link], and rough barnyardgrass [Echinochloa muricata (P. Beauv.) Fernald]. Taxonomical classification revealed that the collection consisted of three Echinochloa species, with E. colona being the most dominant (96%), followed by E. crus-galli (2%), and E. muricata (2%). Correlation analysis of morphophysiological traits and resistance status to commonly used preemergence (clomazone, quinclorac) and postemergence herbicides (propanil, quinclorac, imazethapyr, and fenoxaprop-ethyl) failed to show any significant association. Findings from this study provided novel insights into the morphophysiological characteristics of Echinochloa ecotypes in rice production in Texas. The morphological diversity currently present in Echinochloa ecotypes could contribute to their adaptation to selection pressure imposed by different management tools, emphasizing the need for a diversified management approach to effectively control this weed species.

In 2015, plants of Sumatran fleabane [Conyza sumatrensis (Retz.) E. Walker] were identified in a crop field with an unusual rapid necrosis herbicide symptom after application of 2,4-D. An initial study identified that the symptoms began about 2 h after herbicide application, the resistance factor was high (resistance factor = 19), and the resistance decreased at low light. The mechanism of resistance is not yet known, but the symptomatology suggests it may be related to reduced translocation, ATP-binding cassette (ABC) class B transporters, changes on auxin perception genes, or induction of genes involved in response to pathogens and abiotic stresses. The objective of this study was to use inhibitors of enzymes involved in detoxification and carriers to investigate the mechanisms involved in the resistance to 2,4-D caused by rapid necrosis. Neither the inhibitors of ABC and auxin transporters, triiodobenzoic acid (TIBA), 1-N-naphythylphthalamic acid (NPA), verapamil, and orthovanadate, nor the inhibitors of detoxifying enzymes, such as malathion, 4-chloro-7-nitrobenzofurazan (NBD-Cl), and imidazole, reduced the frequency of the rapid necrosis phenotype. However, orthovanadate and sodium azide (possibly related to auxin transport) were able to partially reduce oxidative stress in leaf disks. The expression of ABCM10 (an ABCD transporter gene), TIR1_1 (an auxin receptor gene), and CAT4 (an amino acid transporter gene) was quickly reduced after 2,4-D application in the resistant accession. Contrary to our hypothesis, LESION SIMULATING DISEASE RESISTANCE 1_3 (LSD1_3) expression increased in response to 2,4-D. LSD1_3 is important for the response to pathogen and abiotic stresses. The rapid necrosis mechanism is not related to 2,4-D detoxification but might be related to changes in the TIR receptor or auxin transport. Mutations in other transporters or in proteins involved in abiotic and pathogen stresses cannot be ruled out.

Herbicide-resistant weed management is one of the greatest agricultural challenges in crop production. Thus, the quick identification of herbicide-resistant weeds is extremely important for management. This study aimed to evaluate resistance to PSI-inhibiting herbicides (diquat) and physiological response to paraquat application in Sumatran fleabane [Conyza sumatrensis (Retz.) E. Walker; syn.: Erigeron sumatrensis Retz.]. The research was conducted with two C. sumatrensis biotypes, one susceptible and the other with multiple resistance to herbicides from five different modes of action (glyphosate, paraquat, diuron, saflufenacil, and 2,4-D). A dose–response assay was carried out to evaluate herbicide resistance to diquat in the paraquat-resistant C. sumatrensis biotype. The enzymatic activities of superoxide dismutase (SOD), catalase (CAT), and ascorbate peroxidase (APX), hydrogen peroxide (H2O2) content, and chlorophyll a (Chl a) fluorescence were measured in both biotypes after paraquat (400 g ai ha−1) application. The dose–response assay confirmed resistance of C. sumatrensis to diquat with resistance factor levels of 26-fold and 6-fold for LD50 and GR50 values, respectively, compared with the susceptible biotype. Accumulation of H2O2 occurred more rapidly in the paraquat-susceptible biotype than in the resistant one. Paraquat treatment caused an increase in SOD and APX activity in the susceptible biotype, but antioxidant enzyme activities were unaffected by paraquat in the resistant one at 5 h after application (HAA). Chl a fluorescence increased across the first 4 HAA in both resistant and susceptible biotypes. However, at 24 HAA, the resistant biotype showed a decline in fluorescence close to untreated plants, while the susceptible biotype died, confirming resistance to diquat in the paraquat-resistant C. sumatrensis biotype. The paraquat-resistant biotype does not induce antioxidative enzymes, as a possible mechanism of resistance to paraquat, but shows rapid recovery of photosynthesis and continuous growth when subjected to paraquat, while the paraquat-susceptible biotype does not survive.

Goosegrass [Eleusine indica (L.) Gaertn.] remains problematic for bermudagrass [Cynodon dactylon (L.) Pers.] turf managers due to the ineffective, selective control of mature plants with available postemergence herbicides and lack of sufficient residual activity from those herbicides to control seedling plants. Topramezone controls mature E. indica, but past efforts to suppress potential injury to bermudagrass turf have been inconsistent. We hypothesized that metribuzin at 210 g ai ha−1 in admixture with topramezone would improve bermudagrass tolerance while conserving mature E. indica control. In preliminary field studies, metribuzin mixed with topramezone at 1.2 or 2.5 g ae ha−1 applied twice at a 3-wk interval reduced bermudagrass injury and white discoloration compared with topramezone applied alone, but metribuzin did not safen bermudagrass to mesotrione. Topramezone at 3.7 g ha−1 plus 210 g ha−1 metribuzin applied twice at a 3-wk interval offered improved bermudagrass tolerance while it still controlled mature E. indica during 15 field and 2 greenhouse studies in Virginia. This program offered a 10-fold decrease in suprathreshold duration of white discoloration compared with topramezone alone at 6.1 g ha−1. Bermudagrass absorbed three times less radioactivity than E. indica at timings up to 48 h after treatment with [14C]topramezone. Bermudagrass also metabolized twice as much topramezone compared with E. indica at 48 h after treatment. Metribuzin reduced 14C absorption by approximately 25% in both species. These studies confirm the performance of a novel, low-dose topramezone plus metribuzin program for mature E. indica control in bermudagrass turf and suggest that selectivity between bermudagrass and E. indica to topramezone is due to differential absorption and metabolism. The fact that metribuzin reduces topramezone absorption in both species suggests that it may help reduce bermudagrass phytotoxic response to topramezone, but its role in altering selectivity between bermudagrass and E. indica may be due to other factors.

Tall fleabane [Conyza sumatrensis (Retz.) E. Walker] is commonly invasive in agricultural fields, reducing yield in various infested crops. The current study investigates the genetic diversity within and between a significant number of invasive C. sumatrensis biotypes in soybean fields in southern, southeastern, and midwestern Brazil, using microsatellites as molecular markers. High and low observed and expected heterozygosity estimated in microsatellite loci supported our hypothesis that different levels of genetic diversity may be detected within biotypes from different invaded fields. Analysis of a significant number of biotypes in several fields showed high and low genetic diversity not associated with geographic distribution, bottleneck effect, or susceptibility to glyphosate. A deficit of heterozygous plants, high genetic divergence, and moderate allelic transference were also observed. Allelic fixation was different in the different biotypes. The bottleneck effect was seen in biotypes with reduced genetic diversity and in biotypes with the highest genetic diversity. Data on genetic diversity, bottleneck effect, and glyphosate resistance showed contrasts in biotypes from nearby invaded fields. Our study showed different genetic diversity levels in biotypes from invaded areas under the same climatic conditions.

Seed retention, and ultimately seed shatter, are extremely important for the efficacy of harvest weed seed control (HWSC) and are likely influenced by various agroecological and environmental factors. Field studies investigated seed-shattering phenology of 22 weed species across three soybean [Glycine max (L.) Merr.]-producing regions in the United States. We further evaluated the potential drivers of seed shatter in terms of weather conditions, growing degree days, and plant biomass. Based on the results, weather conditions had no consistent impact on weed seed shatter. However, there was a positive correlation between individual weed plant biomass and delayed weed seed–shattering rates during harvest. This work demonstrates that HWSC can potentially reduce weed seedbank inputs of plants that have escaped early-season management practices and retained seed through harvest. However, smaller individuals of plants within the same population that shatter seed before harvest pose a risk of escaping early-season management and HWSC.

The establishment of plants in an ecosystem is limited by the availability of seeds and the availability of suitable sites for establishment. Describing plant population dynamics through the relative strength of seed and establishment limitation is an important concept in the study of natural ecosystems. To date, it is unclear whether this concept can be applied to describe populations of annual weeds in agricultural fields. Using a recruitment function, we show that limitation parameters prove valuable in describing seedling recruitment in weed populations. We conducted a seed addition experiment in three cornfields (Zea mays L.) and recorded seedling recruitment in populations of the economically important weed barnyardgrass [Echinochloa crus-galli (L.) P. Beauv.]. Seed predation, competition with other weeds, and seed burial were prevented. We estimated the strength of seed and establishment limitation in the population with two parameters: n, which is the number of microsites, and b, which is the suitability of those sites to support a seedling. We further estimated the relative proportions of density-dependent and density-independent establishment limitation in the seedling population. Recruitment rates of E. crus-galli ranged from 31% to 36% across all evaluated seed densities and fields, which is high compared with results from other seed addition studies. Two of the three monitored populations were predominantly establishment limited at the highest evaluated seed density of 2,400 added seeds m−2. Further knowledge about the relative strength of limitations in other weed populations will provide important information on how effective different weed management strategies can be.

California rice (Oryza sativa L.) production has been recently challenged by the early-season nuisance algae blooms. The algal community in rice is a complex of green algae (Nostoc spongiforme Agardh ex Bornet) and cyanobacteria species that can develop a thick algal mat on the surface of the water and interfere with the emergence and establishment of rice seedlings. The objective of this research was to determine the impact of algal infestation level on rice seedling emergence. A mesocosm study was conducted in 57-L tubs. Three levels of algal infestation (low, medium, and high) were produced by adding fertilizer (N:P) into the tubs at 0:0, 75:35, and 150:70 kg−1 ha. Sixty rice seeds (‘M-206’) were soaked for 24 h and spread into tubs filled with water. Photosynthetic active radiation (PAR), chlorophyll a concentration as the quantitative measure of algae, number of emerged rice seedlings, and their dry biomass were studied during the experiment. Results showed that algal infestation can directly change the amount of light received into the water. Minimum, maximum, and mean percentage of PAR inside the water declined as the algal infestation level increased. As a consequence, rice seedling emergence dropped under the high algal pressure. At very high algal infestation (i.e., chlorophyll a concentration of above 500 µg ml−1), rice seedling emergence was reduced up to 90%. Furthermore, rice seedling emergence was delayed under algal infestation. When algal infestation was low, time to 50% rice seedling emergence (t50) ranged between 5 and 10 d, while at high algal infestation, t50 ranged between 12 and 20 d. Moreover, individual rice seedling biomass was reduced from 1 g to 0.01 g as algal infestation increased. The results from this study indicate that uncontrolled algae at the beginning of the rice-growing season could reduce rice seedling emergence, establishment, and rice stand. Given that algal infestation in fields has a patchy pattern, loss of rice stand in these patches could provide empty niches for other weeds to grow.

Wild mustard (Sinapis arvensis L.) is a widespread weed of the southeastern cropping region of Australia. Seed germination ecology of S. arvensis populations selected from different climatic regions may differ due to adaptative traits. Experiments were conducted to evaluate the effects of temperature, light, radiant heat, soil moisture, salt concentration, and burial depth on seed germination and seedling emergence of two populations (Queensland [Qld] population: tropical region; and Victoria [Vic] population: temperate region) of S. arvensis. Both populations germinated over a wide range of day/night (12-h/12-h) temperatures (15/5 to 35/25 C), and had the highest germination at 30/20 C. Under complete darkness, the Qld population (61%) had higher germination than the Vic population (21%); however, under the light/dark regime, both populations had similar germination (78% to 86%). At 100 C pretreatment for 5 min, the Qld population (44%) had higher germination than the Vic population (13%). Germination of both populations was nil when given pretreatment at 150 and 200 C. The Vic population was found tolerant to high osmotic and salt stress compared with the Qld population. At an osmotic potential of −0.4 MPa, germination of Qld and Vic populations was reduced by 85% and 42%, respectively, compared with their respective controls. At 40, 80, and 160 mM sodium chloride, germination was lower for the Qld population than the Vic population. Averaged over the populations, seedling emergence was highest (52%) from a burial depth of 1 cm and was nil from 8-cm depth. Differential germination behaviors of both populations to temperature, light, radiant heat, water stress, and salt stress suggest that populations of S. arvensis may have undergone differential adaptation. Knowledge gained from this study will assist in developing suitable control measures for this weed species to reduce the soil seedbank.

Cover crop residue left on the soil surface as organic mulch in no-tillage crop production provides several environmental benefits, including weed suppression. Thus, many farmers who use cover crops attempt to reduce the use of agricultural inputs, especially herbicides. Therefore, our objectives were to study the potential of different cover crop species to suppress weeds and produce an in situ organic mulch and to evaluate the effect of the organic mulch with and without spraying glyphosate on weed suppression for vegetable (tomato [Solanum lycopersicum L.] and broccoli [Brassica oleracea L. var. botrytis]) growth and yield. Five cover crop treatments (sunn hemp [Crotalaria juncea L.], jack bean [Canavalia ensiformis (L.) DC.], pearl millet [Pennisetum glaucum (L.) R. Br.], forage sorghum [Sorghum bicolor (L.) Moench ssp. bicolor], and no cover crop [control]) were used in the main plots; and glyphosate was or was not sprayed on the flattened cover crop in the subplots of this split-plot experimental design. Organic mulch from pearl millet, sorghum, and sunn hemp resulted in lower weed biomass during the early seasons of both tomato and broccoli than mulch from jack bean and no cover crop (control). Spraying glyphosate after roller-crimping reduced weed biomass by 103 g m−2 and 20 g m−2 by 45 and 60 d after transplanting (DATr) of tomato, respectively, and resulted in a better tomato yield compared with not spraying. Glyphosate reduced weed biomass by 110 g m−2 in the early season of broccoli (30 DATr) but did not affect yield. Terminating high-biomass cover crops with a roller-crimper is a promising technique for weed management in vegetable crops that has the potential to reduce or even eliminate the need for herbicide.

As part of a long-term experiment to determine the impacts of composted manure and straw amendments (replacing 50% of chemical fertilizer with composted pig manure, wheat straw return combined with chemical fertilizer, and setting no fertilizer and chemical fertilizer-only as controls) on rice-associated weeds in a rice (Oryza sativa L.)–wheat (Triticum aestivum L.) rotation system, species richness, abundance, density, and biomass of weeds were assessed during years 8 and 9. Fertilization decreased the species richness and total density of rice-associated weeds but increased their total biomass. The species richness and densities of broadleaf and sedge weeds decreased with fertilization, while species richness of grass weeds increased only with straw return and density was not significantly affected. The shoot biomass per square meter of grass and broadleaf weeds was significantly higher with fertilization treatments than with the no-fertilizer control, while that of sedge weeds declined with fertilizer application. With fertilization, the densities of monarch redstem (Ammannia baccifera L.) and smallflower umbrella sedge (Cyperus difformis L.) decreased, that of Chinese sprangletop [Leptochloa chinensis (L.) Nees] increased, and those of barnyardgrass [Echinochloa crus-galli (L.) P. Beauv.] and monochoria [Monochoria vaginalis (Burm. f.) C. Presl ex Kunth] were not significantly affected. Ammannia baccifera was the most abundant weed species in all treatments. Whereas composted pig manure plus fertilizer resulted in higher density of A. baccifera and lower shoot biomass per plant than chemical fertilizer only, wheat straw return plus chemical fertilizer caused lower density and shoot biomass of A. baccifera. Therefore, it may be possible that fertilization strategies that suppress specific weeds could be used as improved weed management program components in rice production systems.